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The map label for this gene is ydiN [H]

Identifier: 170681814

GI number: 170681814

Start: 1489086

End: 1490351

Strand: Reverse

Name: ydiN [H]

Synonym: EcSMS35_1505

Alternate gene names: 170681814

Gene position: 1490351-1489086 (Counterclockwise)

Preceding gene: 170681306

Following gene: 170679975

Centisome position: 29.4

GC content: 45.26

Gene sequence:

>1266_bases
ATGTCTCAAAATAAGGCTTTCAGCACGCCATTTATCCTGGCTGTTCTTTGTATTTACTTCAGCTATTTCCTGCACGGCAT
TAGTGTTATTACGCTTGCCCAAAACATGACATCTCTGGCAGAAAAGTTTTCCACTGACAACGCGGGCATTGCCTATTTAA
TTTCCGGTATCGGTTTGGGGCGATTGATCAGTATTTTATTCTTCGGTGTGATCTCCGATAAGTTTGGTCGTCGGGCGGTG
ATATTAATGGCAGTAATAATGTATCTGCTATTCTTCTTTGGTATTCCTGCTTGCCCGAATTTAACTCTCGCCTACTGTCT
GGCAGTGTGCGTAGGTATCGCTAACTCAGCGCTGGATACGGGTGGCTACCCCGCGCTCATGGAATGCTTTCCGAAAGCCT
CTGGTTCGGCGGTCATACTGGTTAAAGCGATGGTGTCATTCGGGCAAATGTTCTACCCAATGCTGGTGAGCTATATGTTG
CTCAATAACATCTGGTACGGCTATGGGCTGATTATTCCGGGTATTCTGTTTGTACTGATCACGCTGATGCTGTTGAAAAG
CAAATTCCCCAGCCAGTTGGTGGACGCCAGCGTAGCTAATGAATTACCGCAAATGAACAGCAAACCGTTAGTCTGGCTGG
AAGGTGTTTCATCAGTACTGTTCGGTGTAGCCGCATTCTCGACCTTTTATGTGATTGTGGTGTGGATGCCCAAATATGCG
ATGGCTTTTGCTGGTATGTCAGAAGCTGAGGCATTAAAAACCATCTCTTATTACAGTATGGGTTCGCTGGTCTGTGTCTT
TATTTTTGCCGCACTGCTGAAAAAAATGGTCCGGCCCATCTGGGCTAATGCATTTAACTCTGCACTGGCAACAATAACAG
CTGCCATTATCTACCTGTACCCTTCTCCATTGGTGTGTAATGCCGGAGCCTTTGTTATCGGTTTCTCAGCAGCTGGCGGC
ATTTTACAGCTCGGCGTTTCGGTCATGTCAGAGTTTTTCCCAAAAAGCAAAGCCAAAGTCACCAGTATATATATGATGAT
GGGTGGACTGGCTAACTTTGTTATTCCGCTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCG
ATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAA
AATGATGTGCGGTTTGGCGAGCATAAATTTAGCACCCGGTTAAACACAATTAAGCATAGAGGTTAA

Upstream 100 bases:

>100_bases
ATGTACACAGGGAAAATCATCTTCAGTATAGTAATTATGTAAACCGTCGGAGAACAATACGTACGGTAACGAAATTATCT
TTCAGCAAGGAGCTGTGAAA

Downstream 100 bases:

>100_bases
AGGAGTTAATTATGAATGTTACCGCAAAATACGAATTGATTGGGTTGATGGCCTATCCCATCCGCCACAGTTTATCGCCC
GAAATGCAGAATAAAGCCTT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MSQNKAFSTPFILAVLCIYFSYFLHGISVITLAQNMTSLAEKFSTDNAGIAYLISGIGLGRLISILFFGVISDKFGRRAV
ILMAVIMYLLFFFGIPACPNLTLAYCLAVCVGIANSALDTGGYPALMECFPKASGSAVILVKAMVSFGQMFYPMLVSYML
LNNIWYGYGLIIPGILFVLITLMLLKSKFPSQLVDASVANELPQMNSKPLVWLEGVSSVLFGVAAFSTFYVIVVWMPKYA
MAFAGMSEAEALKTISYYSMGSLVCVFIFAALLKKMVRPIWANAFNSALATITAAIIYLYPSPLVCNAGAFVIGFSAAGG
ILQLGVSVMSEFFPKSKAKVTSIYMMMGGLANFVIPLITGYLSNIGLQYIIVLDFTFALLALITAIIVFIRYYRVFIIPE
NDVRFGEHKFSTRLNTIKHRG

Sequences:

>Translated_421_residues
MSQNKAFSTPFILAVLCIYFSYFLHGISVITLAQNMTSLAEKFSTDNAGIAYLISGIGLGRLISILFFGVISDKFGRRAV
ILMAVIMYLLFFFGIPACPNLTLAYCLAVCVGIANSALDTGGYPALMECFPKASGSAVILVKAMVSFGQMFYPMLVSYML
LNNIWYGYGLIIPGILFVLITLMLLKSKFPSQLVDASVANELPQMNSKPLVWLEGVSSVLFGVAAFSTFYVIVVWMPKYA
MAFAGMSEAEALKTISYYSMGSLVCVFIFAALLKKMVRPIWANAFNSALATITAAIIYLYPSPLVCNAGAFVIGFSAAGG
ILQLGVSVMSEFFPKSKAKVTSIYMMMGGLANFVIPLITGYLSNIGLQYIIVLDFTFALLALITAIIVFIRYYRVFIIPE
NDVRFGEHKFSTRLNTIKHRG
>Mature_420_residues
SQNKAFSTPFILAVLCIYFSYFLHGISVITLAQNMTSLAEKFSTDNAGIAYLISGIGLGRLISILFFGVISDKFGRRAVI
LMAVIMYLLFFFGIPACPNLTLAYCLAVCVGIANSALDTGGYPALMECFPKASGSAVILVKAMVSFGQMFYPMLVSYMLL
NNIWYGYGLIIPGILFVLITLMLLKSKFPSQLVDASVANELPQMNSKPLVWLEGVSSVLFGVAAFSTFYVIVVWMPKYAM
AFAGMSEAEALKTISYYSMGSLVCVFIFAALLKKMVRPIWANAFNSALATITAAIIYLYPSPLVCNAGAFVIGFSAAGGI
LQLGVSVMSEFFPKSKAKVTSIYMMMGGLANFVIPLITGYLSNIGLQYIIVLDFTFALLALITAIIVFIRYYRVFIIPEN
DVRFGEHKFSTRLNTIKHRG

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI226510946, Length=421, Percent_Identity=98.5748218527316, Blast_Score=825, Evalue=0.0,
Organism=Escherichia coli, GI1787981, Length=385, Percent_Identity=36.3636363636364, Blast_Score=255, Evalue=3e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46048; Mature: 45917

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure 
SQNKAFSTPFILAVLCIYFSYFLHGISVITLAQNMTSLAEKFSTDNAGIAYLISGIGLG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHH
RLISILFFGVISDKFGRRAVILMAVIMYLLFFFGIPACPNLTLAYCLAVCVGIANSALDT
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
GGYPALMECFPKASGSAVILVKAMVSFGQMFYPMLVSYMLLNNIWYGYGLIIPGILFVLI
CCCHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLMLLKSKFPSQLVDASVANELPQMNSKPLVWLEGVSSVLFGVAAFSTFYVIVVWMPKYA
HHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAFAGMSEAEALKTISYYSMGSLVCVFIFAALLKKMVRPIWANAFNSALATITAAIIYLY
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PSPLVCNAGAFVIGFSAAGGILQLGVSVMSEFFPKSKAKVTSIYMMMGGLANFVIPLITG
CCCCEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YLSNIGLQYIIVLDFTFALLALITAIIVFIRYYRVFIIPENDVRFGEHKFSTRLNTIKHR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]