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The map label for this gene is fanH [H]

Identifier: 170681457

GI number: 170681457

Start: 3997769

End: 3998287

Strand: Reverse

Name: fanH [H]

Synonym: EcSMS35_3922

Alternate gene names: 170681457

Gene position: 3998287-3997769 (Counterclockwise)

Preceding gene: 170684225

Following gene: 170682879

Centisome position: 78.89

GC content: 40.66

Gene sequence:

>519_bases
ATGATTAACTCTTTCTGTAAATATATTCTTATAGCAGTGACTGCGCAGGCTCCTCTCTGGAGTAATAATGCACTTGCTGC
ACAAACGGCAAGTGCAAACCTACCGATTACGATGGCAGTAACAAATCCACAATGTACCATTAATAATGGGCAAGGATTAC
CTGCCACCGTTCAGCTTCCTGTTGTCACAACCGCGGGAGTATTTGCGGATAACAATAGTACCGAAGTTCCTATTGTTATT
AACTGCGCGGGGAGTGTCTCGAAATTTGAAATTACATTAATAGGAGGAACTGCTTCGAAAATCACGACCAGTAATAATAT
GGTTGATATTGCACTTGTATGGAAACAGGGAGGTTCAGCTGTTCAGTTTGGAACACCAGTAGCTTTAAATAAAGCACCAT
ATCTTGTAAGTAATAAGGAATTTGATGCTTCGCTAATAGCCACCGTCACACCACATACAGGAAATATACCAGCGGGTATC
TATACTGCGAGTTTACCTATAACGTTAACGTACTATTAA

Upstream 100 bases:

>100_bases
AATGTGGCATTAGGGCAGTTTAAACTTTTACCAAAAAAGGTTCCTGAGCAAACAATACAAAGTGGCAATATAGCAACCAG
TCTAACTGTCGAGGTTAGCT

Downstream 100 bases:

>100_bases
TAAAGTATTGAGGAAGTTATCAATTGGTCCGTATTAATGCTGGGGTTATTTCATTGGTATTAATGTCTGGTTAAATCACT
CTTAATAGCGCGCCAGACAT

Product: putative fimbrial protein FanH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MINSFCKYILIAVTAQAPLWSNNALAAQTASANLPITMAVTNPQCTINNGQGLPATVQLPVVTTAGVFADNNSTEVPIVI
NCAGSVSKFEITLIGGTASKITTSNNMVDIALVWKQGGSAVQFGTPVALNKAPYLVSNKEFDASLIATVTPHTGNIPAGI
YTASLPITLTYY

Sequences:

>Translated_172_residues
MINSFCKYILIAVTAQAPLWSNNALAAQTASANLPITMAVTNPQCTINNGQGLPATVQLPVVTTAGVFADNNSTEVPIVI
NCAGSVSKFEITLIGGTASKITTSNNMVDIALVWKQGGSAVQFGTPVALNKAPYLVSNKEFDASLIATVTPHTGNIPAGI
YTASLPITLTYY
>Mature_172_residues
MINSFCKYILIAVTAQAPLWSNNALAAQTASANLPITMAVTNPQCTINNGQGLPATVQLPVVTTAGVFADNNSTEVPIVI
NCAGSVSKFEITLIGGTASKITTSNNMVDIALVWKQGGSAVQFGTPVALNKAPYLVSNKEFDASLIATVTPHTGNIPAGI
YTASLPITLTYY

Specific function: Involved in the biosynthesis of K99 fimbriae [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17875; Mature: 17875

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINSFCKYILIAVTAQAPLWSNNALAAQTASANLPITMAVTNPQCTINNGQGLPATVQLP
CCCHHHEEEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEECCEEEEECCCCCCEEEEEE
VVTTAGVFADNNSTEVPIVINCAGSVSKFEITLIGGTASKITTSNNMVDIALVWKQGGSA
EEEEEEEEECCCCCCCCEEEECCCCCEEEEEEEECCCCCEEEECCCEEEEEEEEECCCCE
VQFGTPVALNKAPYLVSNKEFDASLIATVTPHTGNIPAGIYTASLPITLTYY
EEECCCEEECCCCEEEECCCCCEEEEEEECCCCCCCCCCEEEEECCEEEEEC
>Mature Secondary Structure
MINSFCKYILIAVTAQAPLWSNNALAAQTASANLPITMAVTNPQCTINNGQGLPATVQLP
CCCHHHEEEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEECCEEEEECCCCCCEEEEEE
VVTTAGVFADNNSTEVPIVINCAGSVSKFEITLIGGTASKITTSNNMVDIALVWKQGGSA
EEEEEEEEECCCCCCCCEEEECCCCCEEEEEEEECCCCCEEEECCCEEEEEEEEECCCCE
VQFGTPVALNKAPYLVSNKEFDASLIATVTPHTGNIPAGIYTASLPITLTYY
EEECCCEEECCCCEEEECCCCCEEEEEEECCCCCCCCCCEEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2897066 [H]