Click here to switch to the map view.

The map label for this gene is 170681097

Identifier: 170681097

GI number: 170681097

Start: 3904270

End: 3904800

Strand: Reverse

Name: 170681097

Synonym: EcSMS35_3833

Alternate gene names: NA

Gene position: 3904800-3904270 (Counterclockwise)

Preceding gene: 170682195

Following gene: 170683180

Centisome position: 77.04

GC content: 38.04

Gene sequence:

>531_bases
ATGCGCTACAAAGTCACACTGTTCTTGCTGACTATGATTCTCTGCTTAACAGGGTTCTATTCCTGCAACAAGAACTTCCT
CTTACTCTGGGATGCCAATAATATGTATGTCAGCACAAGAAATAATATCGATAAAGACAAGGTAAAAATAGAATTCGGTA
TCAGCGTCAACACGATCAACCGAGAGACGGATGCCGAATTATTTACTGACAGAGCGAAGTATAGAATTATCTTCGATGGT
AACCTAAAAAACAGGATGATAAATGAGTACGGCGAAAATGATTTTTTAATTACCTACGATGACCGCTGCTATTTATCATT
TCGTCAATTTAAAACCAATCGTCGTCATCAACATGACTATTATTTTGACTTCTTTAACAACAATGGGAATGTCTTTGTCA
CAGTCGAAATCAAAGGCGAGAACCCACTTAAATTTACGCGTAGTTTAAATGATATGCGTCAGCAGTTTTCACCAACTCGT
GAGGATAGCCCTTCTCACTCCTGCAAGGTTATTTCTTCAGATCCTTCTTAA

Upstream 100 bases:

>100_bases
TCCCGGCACGGCGGTAGCGTGCAGATAATTACTGACTGCTGTGGTTTATAGAAAAGGAAGTAACCACACTTTGTGAACGT
AACGTGCTAAAGGAATATGA

Downstream 100 bases:

>100_bases
ACACTGGATCTGGACAATCACGACCAAAATGCGCAGACCAGTCAAAAACTTTACCGTTTTTCACGTAGCGTTGATAAATT
AATGCACCGGTTTCTGTATC

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MRYKVTLFLLTMILCLTGFYSCNKNFLLLWDANNMYVSTRNNIDKDKVKIEFGISVNTINRETDAELFTDRAKYRIIFDG
NLKNRMINEYGENDFLITYDDRCYLSFRQFKTNRRHQHDYYFDFFNNNGNVFVTVEIKGENPLKFTRSLNDMRQQFSPTR
EDSPSHSCKVISSDPS

Sequences:

>Translated_176_residues
MRYKVTLFLLTMILCLTGFYSCNKNFLLLWDANNMYVSTRNNIDKDKVKIEFGISVNTINRETDAELFTDRAKYRIIFDG
NLKNRMINEYGENDFLITYDDRCYLSFRQFKTNRRHQHDYYFDFFNNNGNVFVTVEIKGENPLKFTRSLNDMRQQFSPTR
EDSPSHSCKVISSDPS
>Mature_176_residues
MRYKVTLFLLTMILCLTGFYSCNKNFLLLWDANNMYVSTRNNIDKDKVKIEFGISVNTINRETDAELFTDRAKYRIIFDG
NLKNRMINEYGENDFLITYDDRCYLSFRQFKTNRRHQHDYYFDFFNNNGNVFVTVEIKGENPLKFTRSLNDMRQQFSPTR
EDSPSHSCKVISSDPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20950; Mature: 20950

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYKVTLFLLTMILCLTGFYSCNKNFLLLWDANNMYVSTRNNIDKDKVKIEFGISVNTIN
CEEEEHHHHHHHHHHHHCHHCCCCCEEEEEECCCEEEEECCCCCCCEEEEEEEEEEEEEC
RETDAELFTDRAKYRIIFDGNLKNRMINEYGENDFLITYDDRCYLSFRQFKTNRRHQHDY
CCCCHHHHCCCCEEEEEECCCCCHHHHHHCCCCCEEEEECCCEEEEEEHHCCCCCCCCCE
YFDFFNNNGNVFVTVEIKGENPLKFTRSLNDMRQQFSPTREDSPSHSCKVISSDPS
EEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC
>Mature Secondary Structure
MRYKVTLFLLTMILCLTGFYSCNKNFLLLWDANNMYVSTRNNIDKDKVKIEFGISVNTIN
CEEEEHHHHHHHHHHHHCHHCCCCCEEEEEECCCEEEEECCCCCCCEEEEEEEEEEEEEC
RETDAELFTDRAKYRIIFDGNLKNRMINEYGENDFLITYDDRCYLSFRQFKTNRRHQHDY
CCCCHHHHCCCCEEEEEECCCCCHHHHHHCCCCCEEEEECCCEEEEEEHHCCCCCCCCCE
YFDFFNNNGNVFVTVEIKGENPLKFTRSLNDMRQQFSPTREDSPSHSCKVISSDPS
EEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA