Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
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Accession | NC_010498 |
Length | 5,068,389 |
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The map label for this gene is yceG [H]
Identifier: 170680200
GI number: 170680200
Start: 2051393
End: 2052415
Strand: Reverse
Name: yceG [H]
Synonym: EcSMS35_2030
Alternate gene names: 170680200
Gene position: 2052415-2051393 (Counterclockwise)
Preceding gene: 170683633
Following gene: 170679734
Centisome position: 40.49
GC content: 51.12
Gene sequence:
>1023_bases ATGAAAAAAGTGTTATTGATTATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCG CCATCTTGCCGACAGCAAATTGCTTATCAAAGAAGAGACGATATTTACCCTGAAGGCTGGGACCGGACGTCTGGCGCTCG GTGAACAGCTTTATGCCGATAAGATCATCAATCGCCCACGGGTTTTCCAATGGCTGCTGCGTATCGAACCGGATCTTTCT CACTTTAAAGCCGGGACTTACCGCTTTACACCGCAGATGACCGTGCGCGAGATGCTGAAATTGCTGGAAAGCGGTAAAGA AGCACAGTTCCCTCTGCGACTGGTAGAAGGGATGCGTCTGAGCGATTACCTCAAGCAATTGCGTGAGGCCCCGTATATCA AGCATACGCTGAGCGACGATAAGTACGCCACCGTAGCGCAGGCACTTGAACTGGAAAACCCAGAGTGGATTGAAGGTTGG TTCTGGCCAGACACCTGGATGTATACCGCCAATACCACCGATGTCGCGTTACTCAAGCGAGCGCACAAGAAAATGGTGAA AGCGGTCGATAGCGCCTGGGAAGGGCGTGCGGACGGTCTGCCCTATAAAGATAAAAACCAGCTGGTGACGATGGCATCAA TTATCGAAAAAGAAACCGCCGTTGCCAGTGAACGCGATCAGGTTGCCTCGGTATTTATCAACCGGTTACGCATTGGTATG CGCCTGCAGACCGACCCGACCGTGATTTACGGGATGGGAGAGCGTTATAATGGCAAACTTTCTCGTGCAGACCTGGAAAC GCCGACAGCGTATAACACCTATACCATTACCGGTTTGCCGCCAGGTGCAATAGCTACGCCGGGGGCGGATTCGCTGAAGG CTGCTGCGCATCCGGCAAAAACGCCGTATCTCTATTTTGTGGCCGATGGTAAAGGTGGTCACACGTTTAATACCAATCTT GCCAGTCATAACAAGTCTGTGCAGGATTATCTGAAAGTGCTTAAGGAAAAAAATGCGCAGTAA
Upstream 100 bases:
>100_bases TAATGCCAGTGATGCCCGTACGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTT TGTGAGCGCCCGAATTAGTC
Downstream 100 bases:
>100_bases GTATATCGTCATTGAGGGGCTGGAAGGCGCAGGCAAAACTACCGCGCGTAACGTGGTGGTTGAGACGCTCGAGCAACTGG GTATCCGCGACATGGTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTLKAGTGRLALGEQLYADKIINRPRVFQWLLRIEPDLS HFKAGTYRFTPQMTVREMLKLLESGKEAQFPLRLVEGMRLSDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGW FWPDTWMYTANTTDVALLKRAHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKETAVASERDQVASVFINRLRIGM RLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTITGLPPGAIATPGADSLKAAAHPAKTPYLYFVADGKGGHTFNTNL ASHNKSVQDYLKVLKEKNAQ
Sequences:
>Translated_340_residues MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTLKAGTGRLALGEQLYADKIINRPRVFQWLLRIEPDLS HFKAGTYRFTPQMTVREMLKLLESGKEAQFPLRLVEGMRLSDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGW FWPDTWMYTANTTDVALLKRAHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKETAVASERDQVASVFINRLRIGM RLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTITGLPPGAIATPGADSLKAAAHPAKTPYLYFVADGKGGHTFNTNL ASHNKSVQDYLKVLKEKNAQ >Mature_340_residues MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTLKAGTGRLALGEQLYADKIINRPRVFQWLLRIEPDLS HFKAGTYRFTPQMTVREMLKLLESGKEAQFPLRLVEGMRLSDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGW FWPDTWMYTANTTDVALLKRAHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKETAVASERDQVASVFINRLRIGM RLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTITGLPPGAIATPGADSLKAAAHPAKTPYLYFVADGKGGHTFNTNL ASHNKSVQDYLKVLKEKNAQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=340, Percent_Identity=99.4117647058823, Blast_Score=694, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 38222; Mature: 38222
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTLKAGTGRLALGEQLYAD CHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECEEEEEECCCCCCHHHHHHHHH KIINRPRVFQWLLRIEPDLSHFKAGTYRFTPQMTVREMLKLLESGKEAQFPLRLVEGMRL HHHCCHHHHHHHHHCCCCHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCCCHHHHCCCCH SDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGWFWPDTWMYTANTTDVALLKR HHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCHHHHHHHH AHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKETAVASERDQVASVFINRLRIGM HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE RLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTITGLPPGAIATPGADSLKAAAHPAK EEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCC TPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVLKEKNAQ CCEEEEEEECCCCCEEECCHHHCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTLKAGTGRLALGEQLYAD CHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECEEEEEECCCCCCHHHHHHHHH KIINRPRVFQWLLRIEPDLSHFKAGTYRFTPQMTVREMLKLLESGKEAQFPLRLVEGMRL HHHCCHHHHHHHHHCCCCHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCCCHHHHCCCCH SDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGWFWPDTWMYTANTTDVALLKR HHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCHHHHHHHH AHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKETAVASERDQVASVFINRLRIGM HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE RLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTITGLPPGAIATPGADSLKAAAHPAK EEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCC TPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVLKEKNAQ CCEEEEEEECCCCCEEECCHHHCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 1644759; 8631667 [H]