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The map label for this gene is dppC [H]

Identifier: 170077541

GI number: 170077541

Start: 951021

End: 951881

Strand: Reverse

Name: dppC [H]

Synonym: SYNPCC7002_A0919

Alternate gene names: 170077541

Gene position: 951881-951021 (Counterclockwise)

Preceding gene: 170077542

Following gene: 170077539

Centisome position: 31.64

GC content: 54.36

Gene sequence:

>861_bases
ATGTGGGCTGTTATGGCAGGGGAAAATCCTGAGGCAAAACTTTCGCGTCGCCTGGCCCTGGTGGGGGTGACGCTTACCGG
GCTATTTGTGGCGATCGCCCTCGGCGCACCCTTATTAGAAAATGTCGGCTGGTTGAAAGATCCCCTCGATTCCCTCAGTT
TCCCGATCCATAGTCCCCCCAGTTGGAACCATTGGTTTGGCACCAGTCGCCAGGGTTACGATGTTTTGTCCCGCACCCTC
TTTGGTACCCAGGCAGCCCTCAAGGTAGTGCTGCTAGCCACGAGTCTCAGTTTAATAATCGGCGTTCCCCTGGGGATGGT
GAGTGGATATTTTGGTGGCAAGGTAGACCGGGTGCTGCTGTTTTTAATGGATACGATCTATACCCTACCGGGATTGCTGT
TGTCCGTTACCCTCGCCTTTGTGGTGGGCAAAGGGGTCATTAATGCGGCGATCGCCCTGAGCATTTCCTATGTGCCCCAA
TATTTTCGCCTTGTCCGCAACCGCACCACCAGCGCCAAAACAGAACTGTTTATCGAAGCAGCCCAGGCCATGGGCGCAAC
GCCAAGGCGAATTTTGTCGAAATATTTGTTTCTCAATGTAATCCAGAGTGTACCGGTACTGTTTACCCTCAATGCTGCCG
ATGCGATTTTAATTCTGGGGGGCTTGGGCTTTTTGGGTTTAGGTTTGCCCGATGGCACGCCGGAATGGGGCCATGATTTG
CGCCTCGCCCTCGATGCTTTGCCGACGGGGATTTGGTGGACGGCGCTGTTTCCGGGGCTGACCATGACCCTGATGGTGAT
GGGTTTATCTTTGCTAGGGGAAGGCTTAAACACCTGGCTAAATCCTGCGAACCGCCGCTAG

Upstream 100 bases:

>100_bases
GACTTATCCGATCGAGAAAGTATTCTGATTGGTTTAGATATTTGGTAAAAGCCATGGGGAGAGACCGCCCAACCGCTATA
CTGACAGACGTTCTGTTTTA

Downstream 100 bases:

>100_bases
GGACAACTTTTAGGGCGAGATTCGACCTCAGCGATTAATTGATCTAATTCCCATTGCATCTCCCCTAAAACCCGCTGATA
ACAAGCTTCCACATAGGGGC

Product: ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MWAVMAGENPEAKLSRRLALVGVTLTGLFVAIALGAPLLENVGWLKDPLDSLSFPIHSPPSWNHWFGTSRQGYDVLSRTL
FGTQAALKVVLLATSLSLIIGVPLGMVSGYFGGKVDRVLLFLMDTIYTLPGLLLSVTLAFVVGKGVINAAIALSISYVPQ
YFRLVRNRTTSAKTELFIEAAQAMGATPRRILSKYLFLNVIQSVPVLFTLNAADAILILGGLGFLGLGLPDGTPEWGHDL
RLALDALPTGIWWTALFPGLTMTLMVMGLSLLGEGLNTWLNPANRR

Sequences:

>Translated_286_residues
MWAVMAGENPEAKLSRRLALVGVTLTGLFVAIALGAPLLENVGWLKDPLDSLSFPIHSPPSWNHWFGTSRQGYDVLSRTL
FGTQAALKVVLLATSLSLIIGVPLGMVSGYFGGKVDRVLLFLMDTIYTLPGLLLSVTLAFVVGKGVINAAIALSISYVPQ
YFRLVRNRTTSAKTELFIEAAQAMGATPRRILSKYLFLNVIQSVPVLFTLNAADAILILGGLGFLGLGLPDGTPEWGHDL
RLALDALPTGIWWTALFPGLTMTLMVMGLSLLGEGLNTWLNPANRR
>Mature_286_residues
MWAVMAGENPEAKLSRRLALVGVTLTGLFVAIALGAPLLENVGWLKDPLDSLSFPIHSPPSWNHWFGTSRQGYDVLSRTL
FGTQAALKVVLLATSLSLIIGVPLGMVSGYFGGKVDRVLLFLMDTIYTLPGLLLSVTLAFVVGKGVINAAIALSISYVPQ
YFRLVRNRTTSAKTELFIEAAQAMGATPRRILSKYLFLNVIQSVPVLFTLNAADAILILGGLGFLGLGLPDGTPEWGHDL
RLALDALPTGIWWTALFPGLTMTLMVMGLSLLGEGLNTWLNPANRR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=230, Percent_Identity=35.2173913043478, Blast_Score=148, Evalue=4e-37,
Organism=Escherichia coli, GI1787760, Length=228, Percent_Identity=32.8947368421053, Blast_Score=138, Evalue=4e-34,
Organism=Escherichia coli, GI1789964, Length=246, Percent_Identity=35.7723577235772, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1789889, Length=226, Percent_Identity=33.6283185840708, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI1788505, Length=256, Percent_Identity=30.078125, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787498, Length=267, Percent_Identity=29.2134831460674, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1787549, Length=225, Percent_Identity=29.7777777777778, Blast_Score=85, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30832; Mature: 30832

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWAVMAGENPEAKLSRRLALVGVTLTGLFVAIALGAPLLENVGWLKDPLDSLSFPIHSPP
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHCCHHHCCCCCCCCC
SWNHWFGTSRQGYDVLSRTLFGTQAALKVVLLATSLSLIIGVPLGMVSGYFGGKVDRVLL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
FLMDTIYTLPGLLLSVTLAFVVGKGVINAAIALSISYVPQYFRLVRNRTTSAKTELFIEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AQAMGATPRRILSKYLFLNVIQSVPVLFTLNAADAILILGGLGFLGLGLPDGTPEWGHDL
HHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHH
RLALDALPTGIWWTALFPGLTMTLMVMGLSLLGEGLNTWLNPANRR
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MWAVMAGENPEAKLSRRLALVGVTLTGLFVAIALGAPLLENVGWLKDPLDSLSFPIHSPP
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHCCHHHCCCCCCCCC
SWNHWFGTSRQGYDVLSRTLFGTQAALKVVLLATSLSLIIGVPLGMVSGYFGGKVDRVLL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
FLMDTIYTLPGLLLSVTLAFVVGKGVINAAIALSISYVPQYFRLVRNRTTSAKTELFIEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AQAMGATPRRILSKYLFLNVIQSVPVLFTLNAADAILILGGLGFLGLGLPDGTPEWGHDL
HHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHH
RLALDALPTGIWWTALFPGLTMTLMVMGLSLLGEGLNTWLNPANRR
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]