| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is mrp [H]
Identifier: 170077536
GI number: 170077536
Start: 946085
End: 947146
Strand: Reverse
Name: mrp [H]
Synonym: SYNPCC7002_A0914
Alternate gene names: 170077536
Gene position: 947146-946085 (Counterclockwise)
Preceding gene: 170077537
Following gene: 170077531
Centisome position: 31.49
GC content: 53.39
Gene sequence:
>1062_bases ATGGCTGATACCCAAGCAATTCTGGCTGCCCTCCGTCCCGTTCAAGATCCTGAGCTGCAAAAAAGCCTGGTGGATCTCAA TATGATCCGCAATGTTTCTGTGGAGAATGGTACGGTGAAATTCACCCTGGTGCTTACAACGCCCGCTTGTCCCCTCAAGG AATTTATCGTCGAGGAGTGCAAAAATGCTGTGCTGCCTTTACCTGGGGTAAACGCTGTGGATGTGGAAGTCACCGCCGAA ACGCCTCAACAGAAAGCACTGCCTAACCAACAGGGCATTGATAACGTCAAAAATATCATTGCCATCTCCAGCGGCAAAGG GGGCGTTGGTAAAAGTAGCGTTGCGGTGAATGTGGCGATCGCCCTGGCCCAAACTGGCGCAAAAGTCGGCCTCTTGGATG CAGATATCTACGGGCCAAATGTGCCGAACATGATGGGCATCGGCGAAGTAGAGATTAAGGTCGATAAAACAGGCGGCCAA GATATTCTCCAGCCAGAATTTAACCATGGGGTCAAACTCGTTTCCATGGCGTTCCTGATTGACCCAGACCAACCAGTGAT TTGGCGAGGGCCGATGCTCAACGGCATCATTCGTCAGTTTCTCTACCAGGTGAACTGGGGCGAACTGGACTATCTCATTG TTGATATGCCCCCTGGTACGGGTGATGCCCAACTAACGATGGCCCAGGCGGTGCCCATGGCCGGTGCTGTCATTGTCACC ACTCCCCAAACCGTTTCTCTCCTAGACTCGCGCCGGGGCCTTAAGATGTTCCAGCAAATGGGAGTGAATGTGCTGGGAAT TGTTGAAAATATGAGCTACTTTATCCCGCCGGATCTGCCAGATCGCCAATATGACCTGTTTGGCTCTGGGGGCGGCGAAA AAACCGCGAACGAATTGGATGTGCCTCTCCTCGGCTGCATTCCCTTAGAAATTGCGCTCCGGGAAGGGGGCGACACTGGT ACACCGATTGTGGTCGCCCAACCAGAATCTGCTTCGGCTAAGGCTCTGGTCTCCATCGCTAAGGCGATCGCCGCGAAAGT TTCTGTGGCGGCCCTCGCTTAA
Upstream 100 bases:
>100_bases TAGGGCTGCTCCAGGGAAAAGATTTTCTCAGTTTCCTCTACGATATTTTTGTGGGCATTCGCCTGCACCACAAACCCAAA TCCTAAATTTTCCTGAAGTT
Downstream 100 bases:
>100_bases ATTGAACCCTTAAATCTAACTGATCGGCATAAAAAAGGGGGCGTTAGCCCCCAGCTTTTTAGTGAATATTCTGAAAATCA CCGTCGAAAATCGCAATAGT
Product: chromosome partitioning ATPase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MADTQAILAALRPVQDPELQKSLVDLNMIRNVSVENGTVKFTLVLTTPACPLKEFIVEECKNAVLPLPGVNAVDVEVTAE TPQQKALPNQQGIDNVKNIIAISSGKGGVGKSSVAVNVAIALAQTGAKVGLLDADIYGPNVPNMMGIGEVEIKVDKTGGQ DILQPEFNHGVKLVSMAFLIDPDQPVIWRGPMLNGIIRQFLYQVNWGELDYLIVDMPPGTGDAQLTMAQAVPMAGAVIVT TPQTVSLLDSRRGLKMFQQMGVNVLGIVENMSYFIPPDLPDRQYDLFGSGGGEKTANELDVPLLGCIPLEIALREGGDTG TPIVVAQPESASAKALVSIAKAIAAKVSVAALA
Sequences:
>Translated_353_residues MADTQAILAALRPVQDPELQKSLVDLNMIRNVSVENGTVKFTLVLTTPACPLKEFIVEECKNAVLPLPGVNAVDVEVTAE TPQQKALPNQQGIDNVKNIIAISSGKGGVGKSSVAVNVAIALAQTGAKVGLLDADIYGPNVPNMMGIGEVEIKVDKTGGQ DILQPEFNHGVKLVSMAFLIDPDQPVIWRGPMLNGIIRQFLYQVNWGELDYLIVDMPPGTGDAQLTMAQAVPMAGAVIVT TPQTVSLLDSRRGLKMFQQMGVNVLGIVENMSYFIPPDLPDRQYDLFGSGGGEKTANELDVPLLGCIPLEIALREGGDTG TPIVVAQPESASAKALVSIAKAIAAKVSVAALA >Mature_352_residues ADTQAILAALRPVQDPELQKSLVDLNMIRNVSVENGTVKFTLVLTTPACPLKEFIVEECKNAVLPLPGVNAVDVEVTAET PQQKALPNQQGIDNVKNIIAISSGKGGVGKSSVAVNVAIALAQTGAKVGLLDADIYGPNVPNMMGIGEVEIKVDKTGGQD ILQPEFNHGVKLVSMAFLIDPDQPVIWRGPMLNGIIRQFLYQVNWGELDYLIVDMPPGTGDAQLTMAQAVPMAGAVIVTT PQTVSLLDSRRGLKMFQQMGVNVLGIVENMSYFIPPDLPDRQYDLFGSGGGEKTANELDVPLLGCIPLEIALREGGDTGT PIVVAQPESASAKALVSIAKAIAAKVSVAALA
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=266, Percent_Identity=46.6165413533835, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI6912540, Length=255, Percent_Identity=43.1372549019608, Blast_Score=195, Evalue=5e-50, Organism=Homo sapiens, GI118572611, Length=263, Percent_Identity=41.8250950570342, Blast_Score=181, Evalue=9e-46, Organism=Escherichia coli, GI87082045, Length=341, Percent_Identity=43.108504398827, Blast_Score=269, Evalue=2e-73, Organism=Caenorhabditis elegans, GI25143050, Length=267, Percent_Identity=41.1985018726592, Blast_Score=187, Evalue=9e-48, Organism=Saccharomyces cerevisiae, GI6322188, Length=220, Percent_Identity=39.5454545454545, Blast_Score=173, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6321347, Length=261, Percent_Identity=33.7164750957854, Blast_Score=159, Evalue=5e-40, Organism=Drosophila melanogaster, GI24667611, Length=257, Percent_Identity=40.8560311284047, Blast_Score=188, Evalue=6e-48, Organism=Drosophila melanogaster, GI221511043, Length=260, Percent_Identity=36.5384615384615, Blast_Score=184, Evalue=8e-47, Organism=Drosophila melanogaster, GI19921440, Length=271, Percent_Identity=37.6383763837638, Blast_Score=138, Evalue=6e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR015223 - InterPro: IPR002744 - InterPro: IPR000808 [H]
Pfam domain/function: PF01883 DUF59; PF09140 MipZ; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 37255; Mature: 37124
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTQAILAALRPVQDPELQKSLVDLNMIRNVSVENGTVKFTLVLTTPACPLKEFIVEEC CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEECCCEEEEEEEEECCCCCHHHHHHHHH KNAVLPLPGVNAVDVEVTAETPQQKALPNQQGIDNVKNIIAISSGKGGVGKSSVAVNVAI HHCCCCCCCCCEEEEEEECCCCHHHCCCCCCCHHHHHHEEEEECCCCCCCCCCEEEEEEE ALAQTGAKVGLLDADIYGPNVPNMMGIGEVEIKVDKTGGQDILQPEFNHGVKLVSMAFLI EEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEE DPDQPVIWRGPMLNGIIRQFLYQVNWGELDYLIVDMPPGTGDAQLTMAQAVPMAGAVIVT CCCCCEEEECHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEHHCCCCCEEEEE TPQTVSLLDSRRGLKMFQQMGVNVLGIVENMSYFIPPDLPDRQYDLFGSGGGEKTANELD CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCEEEEECCCCCCCCCCCC VPLLGCIPLEIALREGGDTGTPIVVAQPESASAKALVSIAKAIAAKVSVAALA CCEEEEEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure ADTQAILAALRPVQDPELQKSLVDLNMIRNVSVENGTVKFTLVLTTPACPLKEFIVEEC CCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEECCCEEEEEEEEECCCCCHHHHHHHHH KNAVLPLPGVNAVDVEVTAETPQQKALPNQQGIDNVKNIIAISSGKGGVGKSSVAVNVAI HHCCCCCCCCCEEEEEEECCCCHHHCCCCCCCHHHHHHEEEEECCCCCCCCCCEEEEEEE ALAQTGAKVGLLDADIYGPNVPNMMGIGEVEIKVDKTGGQDILQPEFNHGVKLVSMAFLI EEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEE DPDQPVIWRGPMLNGIIRQFLYQVNWGELDYLIVDMPPGTGDAQLTMAQAVPMAGAVIVT CCCCCEEEECHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEHHCCCCCEEEEE TPQTVSLLDSRRGLKMFQQMGVNVLGIVENMSYFIPPDLPDRQYDLFGSGGGEKTANELD CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCEEEEECCCCCCCCCCCC VPLLGCIPLEIALREGGDTGTPIVVAQPESASAKALVSIAKAIAAKVSVAALA CCEEEEEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]