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The map label for this gene is yfdH [C]

Identifier: 170077389

GI number: 170077389

Start: 797098

End: 798039

Strand: Reverse

Name: yfdH [C]

Synonym: SYNPCC7002_A0766

Alternate gene names: 170077389

Gene position: 798039-797098 (Counterclockwise)

Preceding gene: 170077390

Following gene: 170077387

Centisome position: 26.53

GC content: 50.42

Gene sequence:

>942_bases
ATGATTACTTACTCCATCATCATCCCGGTGTACAACGAAGAAGCGAATCTTCCGGAAATGTATCGGCGCGTTGTCCAGGT
CATTGAAGAGTTAGATGGCCCCGCAGAGTTGGTTTTAATCGACGATGGCAGCCAGGATCGTTCCCTCGCCATTTTGGACG
AATTACACCAAAGGGATCCCAGGGTCCACTACTTGAGTTTGGCGAGAAATTTTGGCCATCAAATCGCGGTCACCGCCGGT
TTGCAATATGCCCAAGGGGAGGCGGTCGTTATCATGGACGCTGATCTCCAGGATCCCCCCGAACTGGTTCCTCAACTAAT
TGAAAAATGGCGGGCGGGCTACCATGTGGTCTATGCCCAGCGGGTGAGTCGGGCCAGAGAAAGCTGGTTTAAGAAGCTCA
TGGCCTATGGTTTTTACCGGATTTTAAATCGATTCACCGATGTTTCCATTCCCACGGATACGGGGGATTTCTGTTTGATG
TCCCGTCAAGTGGTGGATATTCTCAACAGTATGCCCGAAAAACACCGCTACATTCGCGGCCTCCGGGCCTGGGTAGGCTT
TCCGCAAACGGCGGTGCAGTTCAACCGGGATCCACGTTTTGCTGGGGAAGTAAAGTACACCTTTCGTAAATCCCTGAAGC
TTGCCATTGATGGGATTATTTCCCTGTCCCGTAAACCCTTAAAGATTGCCACCTATTTGGGTTTGGTGACGGCCCTGGTG
GCGATCGCCATGATGATTTTGGTGTTATTTTGGCGGATCTACAATGCCCCGGCCCAATTAATTGGCTATACCCTGATCAC
CATTGCCATTTTCTTTTTGGGAGCTGTGCAACTCATTTGTCTTGGCATTCTCGGTGAATACATTGGCCGCATTTACGACG
AGGTGAAACAGCGTCCCCTCTACACCGTTAAAAAAGCGGCGGGCTTTGACGAAGTACTTTAG

Upstream 100 bases:

>100_bases
CGATAATGTTATTGGCCATGCCATTTTTAAATTTTGGCCCCTGAACCACCTCGGCAAAATTCTCTAGAACTATTTTCTCA
ACCCATCTCCCCTGCCTTCG

Downstream 100 bases:

>100_bases
CCAGATTTTTCTAAAGTTTGCGGGCGAGGGTCAGACCATCAGCCACGGGCAATACCGTTAAACTAATGCGTGGGTCATTA
TACAAAGCTTCATTGAAAGC

Product: glycosyl transferase, group 2 family protein

Products: GDP; dolichyl D-mannosyl phosphate

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MITYSIIIPVYNEEANLPEMYRRVVQVIEELDGPAELVLIDDGSQDRSLAILDELHQRDPRVHYLSLARNFGHQIAVTAG
LQYAQGEAVVIMDADLQDPPELVPQLIEKWRAGYHVVYAQRVSRARESWFKKLMAYGFYRILNRFTDVSIPTDTGDFCLM
SRQVVDILNSMPEKHRYIRGLRAWVGFPQTAVQFNRDPRFAGEVKYTFRKSLKLAIDGIISLSRKPLKIATYLGLVTALV
AIAMMILVLFWRIYNAPAQLIGYTLITIAIFFLGAVQLICLGILGEYIGRIYDEVKQRPLYTVKKAAGFDEVL

Sequences:

>Translated_313_residues
MITYSIIIPVYNEEANLPEMYRRVVQVIEELDGPAELVLIDDGSQDRSLAILDELHQRDPRVHYLSLARNFGHQIAVTAG
LQYAQGEAVVIMDADLQDPPELVPQLIEKWRAGYHVVYAQRVSRARESWFKKLMAYGFYRILNRFTDVSIPTDTGDFCLM
SRQVVDILNSMPEKHRYIRGLRAWVGFPQTAVQFNRDPRFAGEVKYTFRKSLKLAIDGIISLSRKPLKIATYLGLVTALV
AIAMMILVLFWRIYNAPAQLIGYTLITIAIFFLGAVQLICLGILGEYIGRIYDEVKQRPLYTVKKAAGFDEVL
>Mature_313_residues
MITYSIIIPVYNEEANLPEMYRRVVQVIEELDGPAELVLIDDGSQDRSLAILDELHQRDPRVHYLSLARNFGHQIAVTAG
LQYAQGEAVVIMDADLQDPPELVPQLIEKWRAGYHVVYAQRVSRARESWFKKLMAYGFYRILNRFTDVSIPTDTGDFCLM
SRQVVDILNSMPEKHRYIRGLRAWVGFPQTAVQFNRDPRFAGEVKYTFRKSLKLAIDGIISLSRKPLKIATYLGLVTALV
AIAMMILVLFWRIYNAPAQLIGYTLITIAIFFLGAVQLICLGILGEYIGRIYDEVKQRPLYTVKKAAGFDEVL

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=121, Percent_Identity=31.404958677686, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1788692, Length=304, Percent_Identity=42.1052631578947, Blast_Score=241, Evalue=4e-65,
Organism=Escherichia coli, GI1788588, Length=309, Percent_Identity=34.9514563106796, Blast_Score=177, Evalue=7e-46,
Organism=Caenorhabditis elegans, GI71999402, Length=112, Percent_Identity=33.9285714285714, Blast_Score=67, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6325441, Length=262, Percent_Identity=28.2442748091603, Blast_Score=77, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24585265, Length=121, Percent_Identity=31.404958677686, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.83

Molecular weight: Translated: 35706; Mature: 35706

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITYSIIIPVYNEEANLPEMYRRVVQVIEELDGPAELVLIDDGSQDRSLAILDELHQRDP
CEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCC
RVHYLSLARNFGHQIAVTAGLQYAQGEAVVIMDADLQDPPELVPQLIEKWRAGYHVVYAQ
CHHHHHHHHHCCCEEEEEECCEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHH
RVSRARESWFKKLMAYGFYRILNRFTDVSIPTDTGDFCLMSRQVVDILNSMPEKHRYIRG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHH
LRAWVGFPQTAVQFNRDPRFAGEVKYTFRKSLKLAIDGIISLSRKPLKIATYLGLVTALV
HHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AIAMMILVLFWRIYNAPAQLIGYTLITIAIFFLGAVQLICLGILGEYIGRIYDEVKQRPL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YTVKKAAGFDEVL
HHHHHHCCCCCCC
>Mature Secondary Structure
MITYSIIIPVYNEEANLPEMYRRVVQVIEELDGPAELVLIDDGSQDRSLAILDELHQRDP
CEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCC
RVHYLSLARNFGHQIAVTAGLQYAQGEAVVIMDADLQDPPELVPQLIEKWRAGYHVVYAQ
CHHHHHHHHHCCCEEEEEECCEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHH
RVSRARESWFKKLMAYGFYRILNRFTDVSIPTDTGDFCLMSRQVVDILNSMPEKHRYIRG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHH
LRAWVGFPQTAVQFNRDPRFAGEVKYTFRKSLKLAIDGIISLSRKPLKIATYLGLVTALV
HHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AIAMMILVLFWRIYNAPAQLIGYTLITIAIFFLGAVQLICLGILGEYIGRIYDEVKQRPL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YTVKKAAGFDEVL
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GDPmannose; dolichyl phosphate

Specific reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]