| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077340
Identifier: 170077340
GI number: 170077340
Start: 748071
End: 748535
Strand: Reverse
Name: 170077340
Synonym: SYNPCC7002_A0717
Alternate gene names: NA
Gene position: 748535-748071 (Counterclockwise)
Preceding gene: 170077341
Following gene: 170077337
Centisome position: 24.88
GC content: 55.27
Gene sequence:
>465_bases ATGGATTTAGACCAACAACTGCAAGTCCTCATTGACCAAGCCCCCCAGGATGGCAAGATGCCCCAGGTGATGGCCCAGGC GATCGCCCCAGTCCTCAAAGCCTTCGCCCAAAAATTACAATCCCTCGAATACTATGTTTGTCAATCTTTAGAGGGGGACT GGCTCATCACGACCCTTGCCCAACAGAGCGATCCCCAGCAGACCAAAACCGTTATTTACGGCTTCTCAAGCCTCGCCCTC GCCCAACAGCACCAGGGCAGCAATGCCGATCCGTCCCTAATTGCTGTGCCACTGCCCGTCACCCACCTGTTGTTTCAGCT ATTTTCGCTGGCCGCCGTTGATAGCTTGATCCTCACCGAGGCCCAGGGGAGCCTTGAAATTCGCCGCCAGGATCTGCAAC AGGCCGTTCAACAACAATTATTAGGCGATCGCCCCCGTCAAACCCCAGGTAGTCAGTGGGCTTAA
Upstream 100 bases:
>100_bases CCGGCTCCAGTGCAAAGTTTTCCCTAAAAGGTTTACTGTTGGCCAAGGTTTATCATGGGGAGACCAATGTATTTTTTGGC GATCGCCTTGATATTGTTCT
Downstream 100 bases:
>100_bases ACAAGATACCAAGGACAAACCCAGTTAATCCCTAACTAGATGGGGTATCAGCTTTTGTTTCCTGATCAGAGGTTTCCGGT TTAGCTTCCGTGGCCTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MDLDQQLQVLIDQAPQDGKMPQVMAQAIAPVLKAFAQKLQSLEYYVCQSLEGDWLITTLAQQSDPQQTKTVIYGFSSLAL AQQHQGSNADPSLIAVPLPVTHLLFQLFSLAAVDSLILTEAQGSLEIRRQDLQQAVQQQLLGDRPRQTPGSQWA
Sequences:
>Translated_154_residues MDLDQQLQVLIDQAPQDGKMPQVMAQAIAPVLKAFAQKLQSLEYYVCQSLEGDWLITTLAQQSDPQQTKTVIYGFSSLAL AQQHQGSNADPSLIAVPLPVTHLLFQLFSLAAVDSLILTEAQGSLEIRRQDLQQAVQQQLLGDRPRQTPGSQWA >Mature_154_residues MDLDQQLQVLIDQAPQDGKMPQVMAQAIAPVLKAFAQKLQSLEYYVCQSLEGDWLITTLAQQSDPQQTKTVIYGFSSLAL AQQHQGSNADPSLIAVPLPVTHLLFQLFSLAAVDSLILTEAQGSLEIRRQDLQQAVQQQLLGDRPRQTPGSQWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16982; Mature: 16982
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLDQQLQVLIDQAPQDGKMPQVMAQAIAPVLKAFAQKLQSLEYYVCQSLEGDWLITTLA CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH QQSDPQQTKTVIYGFSSLALAQQHQGSNADPSLIAVPLPVTHLLFQLFSLAAVDSLILTE HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH AQGSLEIRRQDLQQAVQQQLLGDRPRQTPGSQWA CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MDLDQQLQVLIDQAPQDGKMPQVMAQAIAPVLKAFAQKLQSLEYYVCQSLEGDWLITTLA CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH QQSDPQQTKTVIYGFSSLALAQQHQGSNADPSLIAVPLPVTHLLFQLFSLAAVDSLILTE HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH AQGSLEIRRQDLQQAVQQQLLGDRPRQTPGSQWA CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA