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The map label for this gene is typA [H]

Identifier: 170077331

GI number: 170077331

Start: 738969

End: 740762

Strand: Reverse

Name: typA [H]

Synonym: SYNPCC7002_A0708

Alternate gene names: 170077331

Gene position: 740762-738969 (Counterclockwise)

Preceding gene: 170077333

Following gene: 170077330

Centisome position: 24.63

GC content: 51.62

Gene sequence:

>1794_bases
ATGTCTCTTCCCATTCGTAACGTCGCGATTATTGCCCACGTTGACCACGGTAAAACGACCCTTGTTGATGCTCTCTTACA
TCAATCCGGCATTTTCCGAGAAGGCGAAGACATCCCCGATTGCGTGATGGACTCCAATGACCTCGAACGGGAACGGGGTA
TTACGATTCTTTCCAAAAATACCGCCGTCCGTTACAACGACATTCTGATCAATATTGTTGACACCCCTGGCCACGCCGAC
TTTGGTGGTGAGGTAGAGCGTGTCCTCGGCATGGTAGACGGTTGCATTTTGATCGTCGATGCCAATGAAGGCCCAATGCC
CCAGACCCGTTTCGTCTTGAAAAAAGCCCTCGAAAAAGGTCTACGCCCGATCGTTGTCGTTAATAAAATCGACCGCCCCA
ACGTCAATCCTGAAACCGCCGTTGATAAAGTCTTTGATCTGTTCGTTGAACTCGGTGCCGATGACGATCAATGTGACTTC
ACCACTCTCTATGCCTCTGGTTTATCTGGTTTCGCCCGGGAATCCCTCGACGATACCAACGAGGATATGGAACCCCTCTT
CCAAGCGATTCTGCAGCACGTTCCCCCGCCAGCCGGAGATATTAATAAGCCCCTCCAGTTACAAGTTACAACCCTCGATT
ATTCCGATTACCTGGGCCGGATTGTCATCGGTCGTCTCCACAACGGCACGATTAAAGCGGGACAACAGGCAGCCCTGGTC
AAGGAAGATGGCACCATTGCCAAGGCAAAAGTGGCTAAACTGATGGGCTTTGAAGGCTTAAATCGTGTTGAACTTGAAGA
GGCAACCGCCGGAATGATCGTCGCTGTTGCCGGGTTTGCTGATGCCAATATTGGGGAAACGGTAACGTCTCCTGAAGATC
CCCAAGCTTTACCACTAATTAAGGTGGATGAGCCTACATTACAGATGACCTTCTCTGTGAATAATTCTCCCTTTGCGGGC
CAGGAAGGAACCTTTGTGACCTCTCGCCAAATCCGCGATCGCCTCGAAAGAGAACTCGAAACTAATGTGGCCCTGCGGGT
CGAAGATGGCGAGTCCGCCGATAGCTTTGCTGTGTCCGGTCGGGGTGAACTGCACCTGGGTATTTTGATTGAAACCATGC
GTCGGGAAGGTTATGAATTCCAAGTGGCCCAGCCCAAGGTGATTTACCGCGAAGTGAATGGCAAACCCTGCGAGCCTTTT
GAATACCTCGTGCTCGATGTCCCGGAAGAAGCAGTGGGTAGCTGTATCGAACGGCTCGGTCAGCGCAAAGGGGAAATGCA
AGATATGCAAGCTGGCGCAGGTGGACGGACTCAGCTCGAATTTGTGGTACCCGCCCGTGGTTTGATTGGTTTCCGGGGTG
AATTTATCCGGATCACGCGCGGTGCTGGCATTATGAACCATAGTTTCCTGGAATATCGGCCCCTCTGTGGCGACTTCGAC
ACTCGCTACAACGGCGTCATCACTGCCTTTGAAGAAGGCACAGCAACCTTCTATGCCCTCAAGAACGCTGAGGATCGCGG
TCAATTTTTCATTACCCCAGGCACTAAGGTTTACAAAGGCATGATTGTCGGGGAGCACAACCGTCCCCAAGATCTAGAGC
TAAACGTTTGTAAGGCAAAACAGCTCACGAACCATCGGGCTGCCAGTGGTGATGAACTGGTTCAGTTACAAGCCCCCATG
GAAATGAACCTAGAGCGCGCCCTCGAATATATCGGCCCTGGGGAACTCGTAGAAGTCACGCCCGAATCGATTCGTCTTCG
TAAAGTGGAAACGAAGAAAATGGCAAAACGCTAA

Upstream 100 bases:

>100_bases
AACTTCACAACTTAAATATTAAGAAAGATGATAATTAGGCTACAATTGGGCAGAAATTGTCAAAAAAATTTACAGGTCTT
AGGAACCATCCGTAAAATTT

Downstream 100 bases:

>100_bases
ATTTTCGCTGACCGACTGAACTATTTGAGCTTTCAATAGTAACGACTGATCCTATGCACAAATGGGATCAGTTTTTTGTC
GGTTTAATAAAGGCGATCGC

Product: GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 597; Mature: 596

Protein sequence:

>597_residues
MSLPIRNVAIIAHVDHGKTTLVDALLHQSGIFREGEDIPDCVMDSNDLERERGITILSKNTAVRYNDILINIVDTPGHAD
FGGEVERVLGMVDGCILIVDANEGPMPQTRFVLKKALEKGLRPIVVVNKIDRPNVNPETAVDKVFDLFVELGADDDQCDF
TTLYASGLSGFARESLDDTNEDMEPLFQAILQHVPPPAGDINKPLQLQVTTLDYSDYLGRIVIGRLHNGTIKAGQQAALV
KEDGTIAKAKVAKLMGFEGLNRVELEEATAGMIVAVAGFADANIGETVTSPEDPQALPLIKVDEPTLQMTFSVNNSPFAG
QEGTFVTSRQIRDRLERELETNVALRVEDGESADSFAVSGRGELHLGILIETMRREGYEFQVAQPKVIYREVNGKPCEPF
EYLVLDVPEEAVGSCIERLGQRKGEMQDMQAGAGGRTQLEFVVPARGLIGFRGEFIRITRGAGIMNHSFLEYRPLCGDFD
TRYNGVITAFEEGTATFYALKNAEDRGQFFITPGTKVYKGMIVGEHNRPQDLELNVCKAKQLTNHRAASGDELVQLQAPM
EMNLERALEYIGPGELVEVTPESIRLRKVETKKMAKR

Sequences:

>Translated_597_residues
MSLPIRNVAIIAHVDHGKTTLVDALLHQSGIFREGEDIPDCVMDSNDLERERGITILSKNTAVRYNDILINIVDTPGHAD
FGGEVERVLGMVDGCILIVDANEGPMPQTRFVLKKALEKGLRPIVVVNKIDRPNVNPETAVDKVFDLFVELGADDDQCDF
TTLYASGLSGFARESLDDTNEDMEPLFQAILQHVPPPAGDINKPLQLQVTTLDYSDYLGRIVIGRLHNGTIKAGQQAALV
KEDGTIAKAKVAKLMGFEGLNRVELEEATAGMIVAVAGFADANIGETVTSPEDPQALPLIKVDEPTLQMTFSVNNSPFAG
QEGTFVTSRQIRDRLERELETNVALRVEDGESADSFAVSGRGELHLGILIETMRREGYEFQVAQPKVIYREVNGKPCEPF
EYLVLDVPEEAVGSCIERLGQRKGEMQDMQAGAGGRTQLEFVVPARGLIGFRGEFIRITRGAGIMNHSFLEYRPLCGDFD
TRYNGVITAFEEGTATFYALKNAEDRGQFFITPGTKVYKGMIVGEHNRPQDLELNVCKAKQLTNHRAASGDELVQLQAPM
EMNLERALEYIGPGELVEVTPESIRLRKVETKKMAKR
>Mature_596_residues
SLPIRNVAIIAHVDHGKTTLVDALLHQSGIFREGEDIPDCVMDSNDLERERGITILSKNTAVRYNDILINIVDTPGHADF
GGEVERVLGMVDGCILIVDANEGPMPQTRFVLKKALEKGLRPIVVVNKIDRPNVNPETAVDKVFDLFVELGADDDQCDFT
TLYASGLSGFARESLDDTNEDMEPLFQAILQHVPPPAGDINKPLQLQVTTLDYSDYLGRIVIGRLHNGTIKAGQQAALVK
EDGTIAKAKVAKLMGFEGLNRVELEEATAGMIVAVAGFADANIGETVTSPEDPQALPLIKVDEPTLQMTFSVNNSPFAGQ
EGTFVTSRQIRDRLERELETNVALRVEDGESADSFAVSGRGELHLGILIETMRREGYEFQVAQPKVIYREVNGKPCEPFE
YLVLDVPEEAVGSCIERLGQRKGEMQDMQAGAGGRTQLEFVVPARGLIGFRGEFIRITRGAGIMNHSFLEYRPLCGDFDT
RYNGVITAFEEGTATFYALKNAEDRGQFFITPGTKVYKGMIVGEHNRPQDLELNVCKAKQLTNHRAASGDELVQLQAPME
MNLERALEYIGPGELVEVTPESIRLRKVETKKMAKR

Specific function: Not known; probably interacts with the ribosomes in a GTP dependent manner [H]

COG id: COG1217

COG function: function code T; Predicted membrane GTPase involved in stress response

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding elongation factor family. TypA subfamily [H]

Homologues:

Organism=Homo sapiens, GI157426893, Length=315, Percent_Identity=33.3333333333333, Blast_Score=138, Evalue=2e-32,
Organism=Homo sapiens, GI94966754, Length=132, Percent_Identity=46.2121212121212, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI18390331, Length=145, Percent_Identity=42.0689655172414, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI34147630, Length=275, Percent_Identity=32.7272727272727, Blast_Score=102, Evalue=8e-22,
Organism=Homo sapiens, GI4503483, Length=144, Percent_Identity=38.1944444444444, Blast_Score=102, Evalue=2e-21,
Organism=Homo sapiens, GI310132016, Length=110, Percent_Identity=43.6363636363636, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI310110807, Length=110, Percent_Identity=43.6363636363636, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI310123363, Length=110, Percent_Identity=43.6363636363636, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI19923640, Length=142, Percent_Identity=38.0281690140845, Blast_Score=93, Evalue=8e-19,
Organism=Homo sapiens, GI25306287, Length=142, Percent_Identity=38.0281690140845, Blast_Score=93, Evalue=9e-19,
Organism=Homo sapiens, GI25306283, Length=142, Percent_Identity=38.0281690140845, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI217272894, Length=134, Percent_Identity=41.044776119403, Blast_Score=90, Evalue=6e-18,
Organism=Homo sapiens, GI217272892, Length=134, Percent_Identity=41.044776119403, Blast_Score=90, Evalue=6e-18,
Organism=Homo sapiens, GI94966752, Length=128, Percent_Identity=33.59375, Blast_Score=84, Evalue=5e-16,
Organism=Homo sapiens, GI194018522, Length=263, Percent_Identity=25.4752851711027, Blast_Score=67, Evalue=7e-11,
Organism=Escherichia coli, GI48994988, Length=587, Percent_Identity=54.855195911414, Blast_Score=653, Evalue=0.0,
Organism=Escherichia coli, GI1788922, Length=504, Percent_Identity=27.9761904761905, Blast_Score=144, Evalue=2e-35,
Organism=Escherichia coli, GI1789738, Length=148, Percent_Identity=37.8378378378378, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1790835, Length=145, Percent_Identity=31.7241379310345, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1790412, Length=277, Percent_Identity=29.2418772563177, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1789737, Length=277, Percent_Identity=29.2418772563177, Blast_Score=78, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17557151, Length=308, Percent_Identity=31.1688311688312, Blast_Score=137, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17556745, Length=142, Percent_Identity=40.8450704225352, Blast_Score=106, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI71988811, Length=197, Percent_Identity=33.502538071066, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17533571, Length=144, Percent_Identity=43.0555555555556, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71988819, Length=197, Percent_Identity=33.502538071066, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17506493, Length=174, Percent_Identity=33.3333333333333, Blast_Score=102, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17552882, Length=134, Percent_Identity=36.5671641791045, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17556456, Length=270, Percent_Identity=29.2592592592593, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71994658, Length=154, Percent_Identity=34.4155844155844, Blast_Score=70, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6323320, Length=512, Percent_Identity=27.734375, Blast_Score=143, Evalue=1e-34,
Organism=Saccharomyces cerevisiae, GI6324707, Length=203, Percent_Identity=34.4827586206897, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6320593, Length=203, Percent_Identity=34.4827586206897, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6324761, Length=275, Percent_Identity=32, Blast_Score=107, Evalue=5e-24,
Organism=Saccharomyces cerevisiae, GI6322359, Length=148, Percent_Identity=38.5135135135135, Blast_Score=99, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6323098, Length=149, Percent_Identity=36.9127516778523, Blast_Score=96, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6324166, Length=142, Percent_Identity=38.0281690140845, Blast_Score=88, Evalue=4e-18,
Organism=Drosophila melanogaster, GI78706572, Length=512, Percent_Identity=25.390625, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI28574573, Length=137, Percent_Identity=42.3357664233577, Blast_Score=108, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24582462, Length=138, Percent_Identity=43.4782608695652, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI281363316, Length=281, Percent_Identity=30.9608540925267, Blast_Score=104, Evalue=2e-22,
Organism=Drosophila melanogaster, GI17864358, Length=281, Percent_Identity=30.9608540925267, Blast_Score=104, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24585709, Length=164, Percent_Identity=32.9268292682927, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24585711, Length=164, Percent_Identity=32.9268292682927, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24585713, Length=164, Percent_Identity=32.9268292682927, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21357743, Length=190, Percent_Identity=35.2631578947368, Blast_Score=93, Evalue=6e-19,
Organism=Drosophila melanogaster, GI221458488, Length=147, Percent_Identity=40.8163265306122, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI19921738, Length=246, Percent_Identity=30.0813008130081, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI28572034, Length=169, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=4e-11,
Organism=Drosophila melanogaster, GI17137380, Length=263, Percent_Identity=25.0950570342205, Blast_Score=67, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009022
- InterPro:   IPR000795
- InterPro:   IPR005225
- InterPro:   IPR000640
- InterPro:   IPR004161
- InterPro:   IPR009000
- InterPro:   IPR006298 [H]

Pfam domain/function: PF00679 EFG_C; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]

EC number: NA

Molecular weight: Translated: 65804; Mature: 65673

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS00301 EFACTOR_GTP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPIRNVAIIAHVDHGKTTLVDALLHQSGIFREGEDIPDCVMDSNDLERERGITILSKN
CCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHCCEEEEECC
TAVRYNDILINIVDTPGHADFGGEVERVLGMVDGCILIVDANEGPMPQTRFVLKKALEKG
CEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHC
LRPIVVVNKIDRPNVNPETAVDKVFDLFVELGADDDQCDFTTLYASGLSGFARESLDDTN
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHCCCHHHHHHCCCCC
EDMEPLFQAILQHVPPPAGDINKPLQLQVTTLDYSDYLGRIVIGRLHNGTIKAGQQAALV
CHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECHHHHHCEEEEEEECCCCCCCCCCEEEE
KEDGTIAKAKVAKLMGFEGLNRVELEEATAGMIVAVAGFADANIGETVTSPEDPQALPLI
ECCCCCHHHHHHHHHCCCCCCEEEHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEE
KVDEPTLQMTFSVNNSPFAGQEGTFVTSRQIRDRLERELETNVALRVEDGESADSFAVSG
EECCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECC
RGELHLGILIETMRREGYEFQVAQPKVIYREVNGKPCEPFEYLVLDVPEEAVGSCIERLG
CCCEEEHHHHHHHHHCCCEEEECCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHH
QRKGEMQDMQAGAGGRTQLEFVVPARGLIGFRGEFIRITRGAGIMNHSFLEYRPLCGDFD
HHCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCC
TRYNGVITAFEEGTATFYALKNAEDRGQFFITPGTKVYKGMIVGEHNRPQDLELNVCKAK
CCCCCEEEEEECCCEEEEEEECCCCCCCEEECCCCHHEEEEEEECCCCCCCCEEEEHHHH
QLTNHRAASGDELVQLQAPMEMNLERALEYIGPGELVEVTPESIRLRKVETKKMAKR
HHHCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCEEEECCCCEEEEEEHHHHHHCC
>Mature Secondary Structure 
SLPIRNVAIIAHVDHGKTTLVDALLHQSGIFREGEDIPDCVMDSNDLERERGITILSKN
CCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHCCEEEEECC
TAVRYNDILINIVDTPGHADFGGEVERVLGMVDGCILIVDANEGPMPQTRFVLKKALEKG
CEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHC
LRPIVVVNKIDRPNVNPETAVDKVFDLFVELGADDDQCDFTTLYASGLSGFARESLDDTN
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHCCCHHHHHHCCCCC
EDMEPLFQAILQHVPPPAGDINKPLQLQVTTLDYSDYLGRIVIGRLHNGTIKAGQQAALV
CHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECHHHHHCEEEEEEECCCCCCCCCCEEEE
KEDGTIAKAKVAKLMGFEGLNRVELEEATAGMIVAVAGFADANIGETVTSPEDPQALPLI
ECCCCCHHHHHHHHHCCCCCCEEEHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEE
KVDEPTLQMTFSVNNSPFAGQEGTFVTSRQIRDRLERELETNVALRVEDGESADSFAVSG
EECCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECC
RGELHLGILIETMRREGYEFQVAQPKVIYREVNGKPCEPFEYLVLDVPEEAVGSCIERLG
CCCEEEHHHHHHHHHCCCEEEECCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHH
QRKGEMQDMQAGAGGRTQLEFVVPARGLIGFRGEFIRITRGAGIMNHSFLEYRPLCGDFD
HHCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCC
TRYNGVITAFEEGTATFYALKNAEDRGQFFITPGTKVYKGMIVGEHNRPQDLELNVCKAK
CCCCCEEEEEECCCEEEEEEECCCCCCCEEECCCCHHEEEEEEECCCCCCCCEEEEHHHH
QLTNHRAASGDELVQLQAPMEMNLERALEYIGPGELVEVTPESIRLRKVETKKMAKR
HHHCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCEEEECCCCEEEEEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]