| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is acoC [H]
Identifier: 170077327
GI number: 170077327
Start: 734570
End: 735340
Strand: Reverse
Name: acoC [H]
Synonym: SYNPCC7002_A0704
Alternate gene names: 170077327
Gene position: 735340-734570 (Counterclockwise)
Preceding gene: 170077328
Following gene: 170077325
Centisome position: 24.45
GC content: 42.02
Gene sequence:
>771_bases ATGGGATGTGTTGTTCGGAATGGACGCCTACGTTTAAATCAAGGCCAGATTTTTTGGCGGGAAACAGGTCAAGGGGAGGC GATCGCCTTTATTCACCGGGAATATAGCGACGGTAGTCAGTGGTTAGATTTTTTTGAAAATGTAGGGCCAGATTATCAAT GCTTTGCGCCGGATTTGTTGGGGTTTGGGGATTCTGATCCAGCAGTTTCGTCCCAGTCTATTCAATGGCAAAGTGAAATT TTAGCAGAGTTTTTTAGCCAGTTAAATCTTAAGAAAATATATTTTGTGGGAGATTCCCTTGGAGCTTGGGTCGCTACCCG TTATGCTCTGAACAATCCTGAACAAATTCAAGGTTTGGTCTTACTTTCTCCGATTGGTTTTGAAGCCCCAAATAATGCTG GTTATTTCCTTGAAAAATGCTTATTATTACCAATCCCAATTTTGCCTTGGGGACTTAAATTACTCTACCCCCTAGGTAAG CTAATTGGCCTCGGTCAAAAGATTCAAAAACTTCTCAACTATCGACAACAGTTGCTTAAATCTCCGGCCAGTCGGCGACT TTTGTTTCAGCGGCATCCCAGTGAAATTCAGGCAGAATATCTAAACTCTGAATTGTCTCAGCTAACTGCACCTACGTTAA TTGTTTCAGCCGATCAAGGCTCCCACCAAGCCCTATTGTTTGCCCAAAAAATTCTTCAAGCACAAATGGTTAAAGTCCAA GACAAAATAGAGGCGATCGCCTTGATTAAAAACTGGCTAAAACAACAATGA
Upstream 100 bases:
>100_bases AACAAATGAAAGGTTAAACCCATCCATCGTTTCTGGAGAATTTATCCACGCAAAAGTTGATCGCTCAAAAACCCTCGATA AAGATTATCAAAAAATATTT
Downstream 100 bases:
>100_bases TTTTAAAGCCAATGGGCGAGGGGAAACAAAAGATATTCCAGAAAGAAGAGTTTCCAAATAAATTGATAAAAGCTGGCAAT AGATTTTTTCGATTCAAGAT
Product: hydrolase alpha/beta fold domain-containing protein
Products: NA
Alternate protein names: Acetoin dehydrogenase E2 component; Dihydrolipoamide acetyltransferase component of acetoin cleaving system; Fast-migrating protein; FMP [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MGCVVRNGRLRLNQGQIFWRETGQGEAIAFIHREYSDGSQWLDFFENVGPDYQCFAPDLLGFGDSDPAVSSQSIQWQSEI LAEFFSQLNLKKIYFVGDSLGAWVATRYALNNPEQIQGLVLLSPIGFEAPNNAGYFLEKCLLLPIPILPWGLKLLYPLGK LIGLGQKIQKLLNYRQQLLKSPASRRLLFQRHPSEIQAEYLNSELSQLTAPTLIVSADQGSHQALLFAQKILQAQMVKVQ DKIEAIALIKNWLKQQ
Sequences:
>Translated_256_residues MGCVVRNGRLRLNQGQIFWRETGQGEAIAFIHREYSDGSQWLDFFENVGPDYQCFAPDLLGFGDSDPAVSSQSIQWQSEI LAEFFSQLNLKKIYFVGDSLGAWVATRYALNNPEQIQGLVLLSPIGFEAPNNAGYFLEKCLLLPIPILPWGLKLLYPLGK LIGLGQKIQKLLNYRQQLLKSPASRRLLFQRHPSEIQAEYLNSELSQLTAPTLIVSADQGSHQALLFAQKILQAQMVKVQ DKIEAIALIKNWLKQQ >Mature_255_residues GCVVRNGRLRLNQGQIFWRETGQGEAIAFIHREYSDGSQWLDFFENVGPDYQCFAPDLLGFGDSDPAVSSQSIQWQSEIL AEFFSQLNLKKIYFVGDSLGAWVATRYALNNPEQIQGLVLLSPIGFEAPNNAGYFLEKCLLLPIPILPWGLKLLYPLGKL IGLGQKIQKLLNYRQQLLKSPASRRLLFQRHPSEIQAEYLNSELSQLTAPTLIVSADQGSHQALLFAQKILQAQMVKVQD KIEAIALIKNWLKQQ
Specific function: Dihydrolipoamide acetyltransferase involved in acetoin catabolism [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 lipoyl-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003016 - InterPro: IPR000073 - InterPro: IPR000089 - InterPro: IPR011053 [H]
Pfam domain/function: PF00561 Abhydrolase_1; PF00364 Biotin_lipoyl [H]
EC number: =2.3.1.12 [H]
Molecular weight: Translated: 28890; Mature: 28759
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCVVRNGRLRLNQGQIFWRETGQGEAIAFIHREYSDGSQWLDFFENVGPDYQCFAPDLL CCCEEECCEEEEECCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCEECCHHHC GFGDSDPAVSSQSIQWQSEILAEFFSQLNLKKIYFVGDSLGAWVATRYALNNPEQIQGLV CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCHHHHCEEE LLSPIGFEAPNNAGYFLEKCLLLPIPILPWGLKLLYPLGKLIGLGQKIQKLLNYRQQLLK EECCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SPASRRLLFQRHPSEIQAEYLNSELSQLTAPTLIVSADQGSHQALLFAQKILQAQMVKVQ CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH DKIEAIALIKNWLKQQ HHHHHHHHHHHHHHCC >Mature Secondary Structure GCVVRNGRLRLNQGQIFWRETGQGEAIAFIHREYSDGSQWLDFFENVGPDYQCFAPDLL CCEEECCEEEEECCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCEECCHHHC GFGDSDPAVSSQSIQWQSEILAEFFSQLNLKKIYFVGDSLGAWVATRYALNNPEQIQGLV CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCHHHHCEEE LLSPIGFEAPNNAGYFLEKCLLLPIPILPWGLKLLYPLGKLIGLGQKIQKLLNYRQQLLK EECCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SPASRRLLFQRHPSEIQAEYLNSELSQLTAPTLIVSADQGSHQALLFAQKILQAQMVKVQ CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH DKIEAIALIKNWLKQQ HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2061286 [H]