| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077311
Identifier: 170077311
GI number: 170077311
Start: 715964
End: 716497
Strand: Reverse
Name: 170077311
Synonym: SYNPCC7002_A0688
Alternate gene names: NA
Gene position: 716497-715964 (Counterclockwise)
Preceding gene: 170077312
Following gene: 170077310
Centisome position: 23.82
GC content: 55.62
Gene sequence:
>534_bases TTGTCACCGCCGATGGCTTCTACTTCCCCGAAAAAACAACCGCCTCGCCTGATCACTTTTAAACAACTCATTAAAACCCA CCATGGTCGCGCTTATTTCCTGGGTGGTAGTTGCTTGGCGATGTTAACCCTCAGTAGTGTGGGCTTCGCAACCCTGGTCA ATCCTCGGGTGCCAATTCCGGTGGTGGATAGTCTTTTGGGACAATTGCCAGCCCAGACAGCGGCGCGGGTTTTGGAGGAA ACGGAATCCCCATCATCCCAAACGATCAGTGGTGCGGACGCCCCCCCGGCAACAACAACGCCGCCACCCGCCGAGACTAA TGCTCAGACAAATTCCCCTGGGGGAGAACCGTCCGTGTTACCCCTCTGGATTTATGGAGTCATTGTGCTTTGTGCTCTGG TGGGGCCTTCTCTATTTACCTATGCCCTTTACCGACTCTATCAACAGTCCCGACGACGGCCTCAACTACAGAGACAAGCC TCCCCGGAAGTTGGGCGATCGCCGCTGCCGATGTCCCCTCCCCAAGACGGTTAA
Upstream 100 bases:
>100_bases TCACAAACCTCCCCGTCCTAAATCCAGTTCGTTATGCTGAAGTTACCAGCGATTACCTTGTTTTAATCCCCTTGGCCTAA AGGCTACTAATCTTTAAATT
Downstream 100 bases:
>100_bases GGGCGAATTTATCGGGGGACGGCGGCCACCTCCCCTATAATGTGGAGGGTTAAAAAAACTTTTAGTGTATTTCCACAAAC ATATGGCTCTGTTGGATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSPPMASTSPKKQPPRLITFKQLIKTHHGRAYFLGGSCLAMLTLSSVGFATLVNPRVPIPVVDSLLGQLPAQTAARVLEE TESPSSQTISGADAPPATTTPPPAETNAQTNSPGGEPSVLPLWIYGVIVLCALVGPSLFTYALYRLYQQSRRRPQLQRQA SPEVGRSPLPMSPPQDG
Sequences:
>Translated_177_residues MSPPMASTSPKKQPPRLITFKQLIKTHHGRAYFLGGSCLAMLTLSSVGFATLVNPRVPIPVVDSLLGQLPAQTAARVLEE TESPSSQTISGADAPPATTTPPPAETNAQTNSPGGEPSVLPLWIYGVIVLCALVGPSLFTYALYRLYQQSRRRPQLQRQA SPEVGRSPLPMSPPQDG >Mature_176_residues SPPMASTSPKKQPPRLITFKQLIKTHHGRAYFLGGSCLAMLTLSSVGFATLVNPRVPIPVVDSLLGQLPAQTAARVLEET ESPSSQTISGADAPPATTTPPPAETNAQTNSPGGEPSVLPLWIYGVIVLCALVGPSLFTYALYRLYQQSRRRPQLQRQAS PEVGRSPLPMSPPQDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18883; Mature: 18752
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPMASTSPKKQPPRLITFKQLIKTHHGRAYFLGGSCLAMLTLSSVGFATLVNPRVPIP CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCHHHHCCCCCCHH VVDSLLGQLPAQTAARVLEETESPSSQTISGADAPPATTTPPPAETNAQTNSPGGEPSVL HHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH PLWIYGVIVLCALVGPSLFTYALYRLYQQSRRRPQLQRQASPEVGRSPLPMSPPQDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SPPMASTSPKKQPPRLITFKQLIKTHHGRAYFLGGSCLAMLTLSSVGFATLVNPRVPIP CCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCHHHHCCCCCCHH VVDSLLGQLPAQTAARVLEETESPSSQTISGADAPPATTTPPPAETNAQTNSPGGEPSVL HHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH PLWIYGVIVLCALVGPSLFTYALYRLYQQSRRRPQLQRQASPEVGRSPLPMSPPQDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA