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The map label for this gene is yihI [H]

Identifier: 170026400

GI number: 170026400

Start: 4627342

End: 4627908

Strand: Reverse

Name: yihI [H]

Synonym: YPK_4193

Alternate gene names: 170026400

Gene position: 4627908-4627342 (Counterclockwise)

Preceding gene: 170026402

Following gene: 170026399

Centisome position: 98.69

GC content: 48.85

Gene sequence:

>567_bases
ATGAAGCAGCCAAATAAAGCACCACGCGCGAATATTGCGGCCCCGAAGGGTACAGCAACACCAAAACGTAGAAGAAAGAC
CCGTGATGAGCTGGATGCTGAAGCACGTGACCGTAAACGTCAGAAGAAACACAGTGGCAATCGCTCAGGTGCGAGAACCA
ATGTTGAGGGCAGCAATAAGAAAGGGCATAGCCAGACTCAAGAGAAAGATCCGCGTGTCGGCAGTAAAGTGCCTGTACCG
CTGGTCATTGAGAGCCAGGTCAAAGCCAAGTCAATGCCTAAGCCTGTAGAGAACAATGTGGTTAAGCCACGCCTGACGCC
GGAAGAAGAGCTAGCCAAGCTGGAGAATGACGAACGTCTGGATGCGCTGCTTGATCGTCTGGATAATGACGAAGTATTGA
ACAAAGAAGACCAGGCCTATGTCGATCTGACATTAGACCGTATTGATGCCCTGATGGAGCAATTAGGCATCGAACTGGGT
GATGACGAAGATGATGTTGAGCGAGAAGAGAAGCAGGAAGATATCTTGCAGCTACTGAAACGTGGTAATCCAAAAGATAC
ATTTTAA

Upstream 100 bases:

>100_bases
TGCAGGAAGGCGGCAAACGAGAGCGGCCAACACATCTGCAACTTGGACGGTGGCGGGTATATACTAAATCCGATCCCATA
CTCATTTAAGAGCACAGGTT

Downstream 100 bases:

>100_bases
GTCATGAACTGGGTGGTCCCACTAATAGCCCTACTACTCACGTGTTATCTATTGTGGTTATTAGGTAAACTATGGCGGCT
GTCGCAACGCAAATCACGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKQPNKAPRANIAAPKGTATPKRRRKTRDELDAEARDRKRQKKHSGNRSGARTNVEGSNKKGHSQTQEKDPRVGSKVPVP
LVIESQVKAKSMPKPVENNVVKPRLTPEEELAKLENDERLDALLDRLDNDEVLNKEDQAYVDLTLDRIDALMEQLGIELG
DDEDDVEREEKQEDILQLLKRGNPKDTF

Sequences:

>Translated_188_residues
MKQPNKAPRANIAAPKGTATPKRRRKTRDELDAEARDRKRQKKHSGNRSGARTNVEGSNKKGHSQTQEKDPRVGSKVPVP
LVIESQVKAKSMPKPVENNVVKPRLTPEEELAKLENDERLDALLDRLDNDEVLNKEDQAYVDLTLDRIDALMEQLGIELG
DDEDDVEREEKQEDILQLLKRGNPKDTF
>Mature_188_residues
MKQPNKAPRANIAAPKGTATPKRRRKTRDELDAEARDRKRQKKHSGNRSGARTNVEGSNKKGHSQTQEKDPRVGSKVPVP
LVIESQVKAKSMPKPVENNVVKPRLTPEEELAKLENDERLDALLDRLDNDEVLNKEDQAYVDLTLDRIDALMEQLGIELG
DDEDDVEREEKQEDILQLLKRGNPKDTF

Specific function: A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis [H]

COG id: COG3078

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YihI family [H]

Homologues:

Organism=Escherichia coli, GI1790297, Length=150, Percent_Identity=48.6666666666667, Blast_Score=110, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007336 [H]

Pfam domain/function: PF04220 DUF414 [H]

EC number: NA

Molecular weight: Translated: 21334; Mature: 21334

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQPNKAPRANIAAPKGTATPKRRRKTRDELDAEARDRKRQKKHSGNRSGARTNVEGSNK
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
KGHSQTQEKDPRVGSKVPVPLVIESQVKAKSMPKPVENNVVKPRLTPEEELAKLENDERL
CCCCCHHHCCCCCCCCCCCCEEECCHHHHHCCCCCHHCCCCCCCCCCHHHHHHCCCCHHH
DALLDRLDNDEVLNKEDQAYVDLTLDRIDALMEQLGIELGDDEDDVEREEKQEDILQLLK
HHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
RGNPKDTF
CCCCCCCC
>Mature Secondary Structure
MKQPNKAPRANIAAPKGTATPKRRRKTRDELDAEARDRKRQKKHSGNRSGARTNVEGSNK
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
KGHSQTQEKDPRVGSKVPVPLVIESQVKAKSMPKPVENNVVKPRLTPEEELAKLENDERL
CCCCCHHHCCCCCCCCCCCCEEECCHHHHHCCCCCHHCCCCCCCCCCHHHHHHCCCCHHH
DALLDRLDNDEVLNKEDQAYVDLTLDRIDALMEQLGIELGDDEDDVEREEKQEDILQLLK
HHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
RGNPKDTF
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA