| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170026372
Identifier: 170026372
GI number: 170026372
Start: 4594966
End: 4595385
Strand: Direct
Name: 170026372
Synonym: YPK_4165
Alternate gene names: NA
Gene position: 4594966-4595385 (Clockwise)
Preceding gene: 170026371
Following gene: 170026373
Centisome position: 97.99
GC content: 48.57
Gene sequence:
>420_bases ATGCAAAAGAAAACCCGCACAGAGGCGGGCATTATCGGACAGGTTAGCGCCAACGATAATGCCGCCGTTCATCACATTAA GCCACCGCCTAAGAAGCACCGCGCACGCTGCTACATGATGCGCACCGGCATTGAGGGCTGGACAGAAAACGATATTCTCA AATATGCGCGTTTATCATCTGGCCGTAATTATGCGACTGAACTTGAGCGCCTTCTCAATATTCGCCTGGAACGCATTGAC GAGCGCAACCCTGATAATATTGGGAGTCACTTCCGTTATCGCTTGGCAAGCCGCCATGACGTCCTGCTCGTTATTCAGTT AGTTAATTACAACGCCTTATATAACGGCCACCAGCAATTAACCAAGAACGAAATTAACGACATCTTATATTTATACCCGG ACACACCAGTCGCCGCATAA
Upstream 100 bases:
>100_bases ATGGCGATTTTGTAAAACCGATTGAGTTGTCGGAAGGAGTAAAAGTATTTGATGCGGCAGAAGTTAGAGCCTGGGTTAAC TCAAAGAAAGAGGCTGCATA
Downstream 100 bases:
>100_bases CGGAGCATAAAAATATGACTATTCAAAACATGGCAAATAGCCGTGACGGATACCCCTACGCCCAAAACATGGCGAACGGT ATTAACGAAATTCGTCGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MQKKTRTEAGIIGQVSANDNAAVHHIKPPPKKHRARCYMMRTGIEGWTENDILKYARLSSGRNYATELERLLNIRLERID ERNPDNIGSHFRYRLASRHDVLLVIQLVNYNALYNGHQQLTKNEINDILYLYPDTPVAA
Sequences:
>Translated_139_residues MQKKTRTEAGIIGQVSANDNAAVHHIKPPPKKHRARCYMMRTGIEGWTENDILKYARLSSGRNYATELERLLNIRLERID ERNPDNIGSHFRYRLASRHDVLLVIQLVNYNALYNGHQQLTKNEINDILYLYPDTPVAA >Mature_139_residues MQKKTRTEAGIIGQVSANDNAAVHHIKPPPKKHRARCYMMRTGIEGWTENDILKYARLSSGRNYATELERLLNIRLERID ERNPDNIGSHFRYRLASRHDVLLVIQLVNYNALYNGHQQLTKNEINDILYLYPDTPVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16084; Mature: 16084
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKKTRTEAGIIGQVSANDNAAVHHIKPPPKKHRARCYMMRTGIEGWTENDILKYARLSS CCCCCCCCCCEEEEECCCCCCEEEECCCCCHHHHHEEEEEECCCCCCCCCHHHHHHHHCC GRNYATELERLLNIRLERIDERNPDNIGSHFRYRLASRHDVLLVIQLVNYNALYNGHQQL CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHH TKNEINDILYLYPDTPVAA HHHCCCCEEEECCCCCCCC >Mature Secondary Structure MQKKTRTEAGIIGQVSANDNAAVHHIKPPPKKHRARCYMMRTGIEGWTENDILKYARLSS CCCCCCCCCCEEEEECCCCCCEEEECCCCCHHHHHEEEEEECCCCCCCCCHHHHHHHHCC GRNYATELERLLNIRLERIDERNPDNIGSHFRYRLASRHDVLLVIQLVNYNALYNGHQQL CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHH TKNEINDILYLYPDTPVAA HHHCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA