| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170026314
Identifier: 170026314
GI number: 170026314
Start: 4539058
End: 4539642
Strand: Reverse
Name: 170026314
Synonym: YPK_4107
Alternate gene names: NA
Gene position: 4539642-4539058 (Counterclockwise)
Preceding gene: 170026315
Following gene: 170026305
Centisome position: 96.81
GC content: 53.16
Gene sequence:
>585_bases ATGCAAAGAGGCTGCTGTTTTCTCCGTAGTACAACTACCGCTGGAGTGGCTTTGATCGTTGCCATGACGCTATCGGTATC GGCATGGGCAATTTCAGAACAGGCAAAGTCAGAACAGGCCACGACCGTACCAAATAATGATATCGTCTGTCATGTGGCTC ACCTCAACGCCCGTTTTGACGATAAAGAGGGGCTATTCGAAGGTGCATCACAAAGCGGTACTTTGCTGATATTACGTAAT ATTAGCGCTCGAGCCTGCCAGGTTAATGCAATGCCAGTGATCAGTTTCGAAGGCGCAGTTGGCCAGCAGTTGGCCGTCTT TCGCAAAGTACCGCGTGGGATGCGGCAGGAGCCGGTACTCTCACCCGTCACTGTTGCGGCGGGAGCTGAAGTCGCGGTGC AATTGCGTTGGGTGGCCAGTGACGCGTTCGATGGGAATAACTGTGTAACACCTGAGAAAGTGGTGGTGACCCTGCTAGGG GGGACATTGCGTTTACCTTTCGGCCGACAGATGTGTGCGGCATCTGGTGATACTGAATTCTTCAGTCAGGCACCAGTAGG CCCAGCGACCAATGAGGTGCAATGA
Upstream 100 bases:
>100_bases ATAAACGTATTATCGTGGATTTATTATTTTCACGGCCCGATACCCACAGTGATTATCTATTTACTGACTTAATTCATTCA CATCTTGATGAGGTTTTTTG
Downstream 100 bases:
>100_bases GTATCGGGAGGGGGCAATATTACGCCAGGATCGCAATCACAGTGGATAGGAGAAGAAGGGGAACCTTCTCCTATCTGTGC ACTAATCCCCGTCAGACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MQRGCCFLRSTTTAGVALIVAMTLSVSAWAISEQAKSEQATTVPNNDIVCHVAHLNARFDDKEGLFEGASQSGTLLILRN ISARACQVNAMPVISFEGAVGQQLAVFRKVPRGMRQEPVLSPVTVAAGAEVAVQLRWVASDAFDGNNCVTPEKVVVTLLG GTLRLPFGRQMCAASGDTEFFSQAPVGPATNEVQ
Sequences:
>Translated_194_residues MQRGCCFLRSTTTAGVALIVAMTLSVSAWAISEQAKSEQATTVPNNDIVCHVAHLNARFDDKEGLFEGASQSGTLLILRN ISARACQVNAMPVISFEGAVGQQLAVFRKVPRGMRQEPVLSPVTVAAGAEVAVQLRWVASDAFDGNNCVTPEKVVVTLLG GTLRLPFGRQMCAASGDTEFFSQAPVGPATNEVQ >Mature_194_residues MQRGCCFLRSTTTAGVALIVAMTLSVSAWAISEQAKSEQATTVPNNDIVCHVAHLNARFDDKEGLFEGASQSGTLLILRN ISARACQVNAMPVISFEGAVGQQLAVFRKVPRGMRQEPVLSPVTVAAGAEVAVQLRWVASDAFDGNNCVTPEKVVVTLLG GTLRLPFGRQMCAASGDTEFFSQAPVGPATNEVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20537; Mature: 20537
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRGCCFLRSTTTAGVALIVAMTLSVSAWAISEQAKSEQATTVPNNDIVCHVAHLNARFD CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCC DKEGLFEGASQSGTLLILRNISARACQVNAMPVISFEGAVGQQLAVFRKVPRGMRQEPVL CCCCHHCCCCCCCCEEEEECCCCCEEEECCEEEEEECCCCHHHHHHHHHHHCCCCCCCCC SPVTVAAGAEVAVQLRWVASDAFDGNNCVTPEKVVVTLLGGTLRLPFGRQMCAASGDTEF CCEEEECCCEEEEEEEEEECCCCCCCCCCCHHHEEEEEECCEEECCCCCHHHHCCCCCHH FSQAPVGPATNEVQ HHCCCCCCCCCCCC >Mature Secondary Structure MQRGCCFLRSTTTAGVALIVAMTLSVSAWAISEQAKSEQATTVPNNDIVCHVAHLNARFD CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCC DKEGLFEGASQSGTLLILRNISARACQVNAMPVISFEGAVGQQLAVFRKVPRGMRQEPVL CCCCHHCCCCCCCCEEEEECCCCCEEEECCEEEEEECCCCHHHHHHHHHHHCCCCCCCCC SPVTVAAGAEVAVQLRWVASDAFDGNNCVTPEKVVVTLLGGTLRLPFGRQMCAASGDTEF CCEEEECCCEEEEEEEEEECCCCCCCCCCCHHHEEEEEECCEEECCCCCHHHHCCCCCHH FSQAPVGPATNEVQ HHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA