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The map label for this gene is hslV [H]

Identifier: 170026310

GI number: 170026310

Start: 4535236

End: 4535760

Strand: Direct

Name: hslV [H]

Synonym: YPK_4103

Alternate gene names: 170026310

Gene position: 4535236-4535760 (Clockwise)

Preceding gene: 170026309

Following gene: 170026311

Centisome position: 96.71

GC content: 48.57

Gene sequence:

>525_bases
GTGACAACAATTGTAAGTGTACGCCGTGATGGTCATGTCGTTATTGGTGGCGATGGCCAAGTCACTTTGGGCAATACCGT
GATGAAAGGTAATGCCAAAAAAGTCCGCCGTCTTTATAACAACAAGGTTATTGCTGGCTTTGCGGGGGGGACTGCTGATG
CCTTTACTCTGTTCGAGTTATTTGAACGCAAGCTGGAAATGCATCAAGGCCACCTGACGAAAGCGGCTGTTGAACTAGCC
AAAGACTGGCGCACCGACCGTATGCTGCGCAAGCTTGAAGCGTTACTGGCGGTTGCCGATGAGACCGCTTCACTGATCAT
TACTGGTAACGGTGACGTGGTTCAACCTGAAGATGATCTGATTGCCATTGGCTCCGGTGGGCCTTATGCCCAATCGGCAG
CACGTGCGTTGTTAGAAAATACTGAATTAGGTGCGCGGGATATCGTTGAGAAATCACTGAGTATTGCGGGGGATATTTGT
ATCTACACCAACCGCTTCCAAACCATTGAAGAATTAACATACTAA

Upstream 100 bases:

>100_bases
AAAAGTCTTAATCCTCCCCCATTTATAATCTCAATATACTCCGTACTGTTTTTTAACAGGCAGTACGGGGACTCATTCAG
TCTGCAACGAGGGTCCGCTC

Downstream 100 bases:

>100_bases
ACGTAATTAACGCACTGCATAATTAATGTACAGTACATAATTAACGTACAGAGCGTAAGGATAGAATAATATGTCTGAAA
TGACCCCACGCGAAATAGTT

Product: ATP-dependent protease peptidase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTTIVSVRRDGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELFERKLEMHQGHLTKAAVELA
KDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLIAIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDIC
IYTNRFQTIEELTY

Sequences:

>Translated_174_residues
MTTIVSVRRDGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELFERKLEMHQGHLTKAAVELA
KDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLIAIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDIC
IYTNRFQTIEELTY
>Mature_173_residues
TTIVSVRRDGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELFERKLEMHQGHLTKAAVELAK
DWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLIAIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICI
YTNRFQTIEELTY

Specific function: Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery [H]

COG id: COG5405

COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase T1B family. HslV subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790367, Length=174, Percent_Identity=90.8045977011494, Blast_Score=327, Evalue=3e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022281
- InterPro:   IPR001353 [H]

Pfam domain/function: PF00227 Proteasome [H]

EC number: 3.4.25.-

Molecular weight: Translated: 18895; Mature: 18764

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIVSVRRDGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFEL
CCEEEEEECCCEEEECCCCCEEECCEEEECCHHHHHHHHCCCEEEEECCCCHHHHHHHHH
FERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCE
IAIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEELTY
EEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHCC
>Mature Secondary Structure 
TTIVSVRRDGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFEL
CEEEEEECCCEEEECCCCCEEECCEEEECCHHHHHHHHCCCEEEEECCCCHHHHHHHHH
FERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCE
IAIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEELTY
EEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA