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The map label for this gene is wzzE [H]

Identifier: 170026242

GI number: 170026242

Start: 4447128

End: 4448204

Strand: Reverse

Name: wzzE [H]

Synonym: YPK_4032

Alternate gene names: 170026242

Gene position: 4448204-4447128 (Counterclockwise)

Preceding gene: 170026243

Following gene: 170026241

Centisome position: 94.86

GC content: 48.19

Gene sequence:

>1077_bases
ATGAAACCAGAATCTATGTCGACTGATAAAACAGGGTCTACCAATAATGAACCGTCTGTGGATAACGAATTAGATATCCG
TGGTCTGTGTCGTACTCTATGGCGTGGCAAGGTATGGATTATCGGTATGGCCATTATTTTCGCTGCGATTGCACTGGGAG
TCTCCTATCTGGTGAAACAGCAGTGGAGTGCGACAGCCATTACTGACAAACCAACCGTCAACAATTTGGGGGGGTATTAT
TCGCAACAGCAGTTTTTACGTAATCTTGATATCCGTCTCAATAGCGGGCTTGTCAGTGAACAGCCAGGCATCTCCGATGA
AGCTTACGGTGAGTTCATTACTCAGTTAGCGGCTTACGATACCCGTCGTGATTTCTGGCTACAAAGCGATTACTACAAGC
AACGGCTTGAGGGAGACGCTAAGGCGGATGCGGCATTACTCGATGAGCTAGTGAATAACATTGTTTTCACGGCGCGTGAT
GATAAAAAAATCCCGAATGACAGCATTAAATTGACGGCAGAAACGGCCAGTGATGCGAATAAGCTACTGCGTGGTTACAT
TGATTTTGCCAGTCAACGTGCGTCAAGCCACCTGAATGATGAAATTCAAGGCGCTTGGGCAGCGCGGACTCAATCAATGA
AAGCGCAGGTTAAACGTCAGGAAGCGGTAGCTCAAGCAGTCTTTGATCGTGAAGTGGCGGCGGTTAAGCAAGCATTGAAA
GTGGCTGGGCAACAAGGTATTACCCGTAGCCAGACAGATACGCCAGCCGAGCAATTGGCAGATTCCAAGATGTTCATGCT
AGGTAAGCCGATGCTTGAAGCCCGTTTAGAAACATTACTGGCTACTGGCCCAAGTTTTGATATTGATTATGATCAAAACC
GTGCCATGCTGGCAACATTGAACGTTGGTCCGACACTAGATGATAAATTCCAGACTTACCGCTACTTACGTACACCAGAA
GACCCGGTTACCCGTGATAGCCCACGTCGTGTGTTCCTGCTGATTATGTGGGGCGCTATCGGGGCATTAGTCGGTGCGGG
TGTGGTATTGGTTCGCCGCTCCAATAAGGCACTGTGA

Upstream 100 bases:

>100_bases
GGGCATGGCGGGTGGCGCGTTTTATCAAACGTTTCAAGCGTCGGATGCGGCGGGCATCGAAAAATAAGCATGAATCTTAA
CCAGAGGCTTTTAGGCAGTG

Downstream 100 bases:

>100_bases
CCTGTATGGCCGGTGTCATGTGGAATCAGTAACGGCATGTGTCAGTAACGACTATTTGTTAGTAACGACTATGTGTCAAT
AACTACTCTGTGTCAGTAAC

Product: lipopolysaccharide biosynthesis protein WzzE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKPESMSTDKTGSTNNEPSVDNELDIRGLCRTLWRGKVWIIGMAIIFAAIALGVSYLVKQQWSATAITDKPTVNNLGGYY
SQQQFLRNLDIRLNSGLVSEQPGISDEAYGEFITQLAAYDTRRDFWLQSDYYKQRLEGDAKADAALLDELVNNIVFTARD
DKKIPNDSIKLTAETASDANKLLRGYIDFASQRASSHLNDEIQGAWAARTQSMKAQVKRQEAVAQAVFDREVAAVKQALK
VAGQQGITRSQTDTPAEQLADSKMFMLGKPMLEARLETLLATGPSFDIDYDQNRAMLATLNVGPTLDDKFQTYRYLRTPE
DPVTRDSPRRVFLLIMWGAIGALVGAGVVLVRRSNKAL

Sequences:

>Translated_358_residues
MKPESMSTDKTGSTNNEPSVDNELDIRGLCRTLWRGKVWIIGMAIIFAAIALGVSYLVKQQWSATAITDKPTVNNLGGYY
SQQQFLRNLDIRLNSGLVSEQPGISDEAYGEFITQLAAYDTRRDFWLQSDYYKQRLEGDAKADAALLDELVNNIVFTARD
DKKIPNDSIKLTAETASDANKLLRGYIDFASQRASSHLNDEIQGAWAARTQSMKAQVKRQEAVAQAVFDREVAAVKQALK
VAGQQGITRSQTDTPAEQLADSKMFMLGKPMLEARLETLLATGPSFDIDYDQNRAMLATLNVGPTLDDKFQTYRYLRTPE
DPVTRDSPRRVFLLIMWGAIGALVGAGVVLVRRSNKAL
>Mature_358_residues
MKPESMSTDKTGSTNNEPSVDNELDIRGLCRTLWRGKVWIIGMAIIFAAIALGVSYLVKQQWSATAITDKPTVNNLGGYY
SQQQFLRNLDIRLNSGLVSEQPGISDEAYGEFITQLAAYDTRRDFWLQSDYYKQRLEGDAKADAALLDELVNNIVFTARD
DKKIPNDSIKLTAETASDANKLLRGYIDFASQRASSHLNDEIQGAWAARTQSMKAQVKRQEAVAQAVFDREVAAVKQALK
VAGQQGITRSQTDTPAEQLADSKMFMLGKPMLEARLETLLATGPSFDIDYDQNRAMLATLNVGPTLDDKFQTYRYLRTPE
DPVTRDSPRRVFLLIMWGAIGALVGAGVVLVRRSNKAL

Specific function: Unknown

COG id: COG3765

COG function: function code M; Chain length determinant protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the wzzB/cld/rol family [H]

Homologues:

Organism=Escherichia coli, GI87082332, Length=336, Percent_Identity=68.1547619047619, Blast_Score=495, Evalue=1e-141,
Organism=Escherichia coli, GI87082029, Length=352, Percent_Identity=25, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1786802, Length=353, Percent_Identity=23.5127478753541, Blast_Score=88, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 39784; Mature: 39784

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPESMSTDKTGSTNNEPSVDNELDIRGLCRTLWRGKVWIIGMAIIFAAIALGVSYLVKQ
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
QWSATAITDKPTVNNLGGYYSQQQFLRNLDIRLNSGLVSEQPGISDEAYGEFITQLAAYD
CCCCEECCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHC
TRRDFWLQSDYYKQRLEGDAKADAALLDELVNNIVFTARDDKKIPNDSIKLTAETASDAN
CHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCHHHHH
KLLRGYIDFASQRASSHLNDEIQGAWAARTQSMKAQVKRQEAVAQAVFDREVAAVKQALK
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAGQQGITRSQTDTPAEQLADSKMFMLGKPMLEARLETLLATGPSFDIDYDQNRAMLATL
HHHHCCCCCCCCCCCHHHHHCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
NVGPTLDDKFQTYRYLRTPEDPVTRDSPRRVFLLIMWGAIGALVGAGVVLVRRSNKAL
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCEEEEECCCCCC
>Mature Secondary Structure
MKPESMSTDKTGSTNNEPSVDNELDIRGLCRTLWRGKVWIIGMAIIFAAIALGVSYLVKQ
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
QWSATAITDKPTVNNLGGYYSQQQFLRNLDIRLNSGLVSEQPGISDEAYGEFITQLAAYD
CCCCEECCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHC
TRRDFWLQSDYYKQRLEGDAKADAALLDELVNNIVFTARDDKKIPNDSIKLTAETASDAN
CHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCHHHHH
KLLRGYIDFASQRASSHLNDEIQGAWAARTQSMKAQVKRQEAVAQAVFDREVAAVKQALK
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAGQQGITRSQTDTPAEQLADSKMFMLGKPMLEARLETLLATGPSFDIDYDQNRAMLATL
HHHHCCCCCCCCCCCHHHHHCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
NVGPTLDDKFQTYRYLRTPEDPVTRDSPRRVFLLIMWGAIGALVGAGVVLVRRSNKAL
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]