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The map label for this gene is 170026215

Identifier: 170026215

GI number: 170026215

Start: 4415441

End: 4416271

Strand: Reverse

Name: 170026215

Synonym: YPK_4004

Alternate gene names: NA

Gene position: 4416271-4415441 (Counterclockwise)

Preceding gene: 170026216

Following gene: 170026213

Centisome position: 94.17

GC content: 50.66

Gene sequence:

>831_bases
ATGCCTAAATTTCAACGTCAGGCCATATTGGCCAAGTTTCGGGAAATGATTGCCCGCCGTGAACCTATTATTGGTGGCGG
TGCGGGTACGGGGCTATCAGCCAAATGTGAAGAGGCCGGGGGAATTGATTTAATCGTTATTTATAACTCAGGCCGCTATC
GTATGGCTGGTCGTGGCTCATTGGCGGGGTTACTGGCGTACGGCAATGCCAATGATATTGTGGTTGATATGGCAAAAGAA
GTGCTGCCGGTGGTCAAGAATACCCCCGTTCTGGCCGGTGTTAATGGGACAGACCCCTTCTGCCAATTTGATCACTTTTT
GGACCATCTGAAAGCGCTTGGTTTTTCAGGCGTACAGAACTTCCCCACTGTGGGGTTAATCGACGGTAATTTCCGCGCTA
ACCTTGAAGAAACGGGCATGGGCTATGGGTTGGAAGTGGAAATGATCCGTTTGGCTCACCAAAAAGATTTACTGACCACG
CCCTATGTCTTCAGTGCCGAAGATGCTATCGCGATGACACAAGCGGGTGCCGATATTATTGTGCCGCACATGGGGTTGAC
CACCGGGGGCAACATTGGTGCGGATACGGCACTGAAGCTGGCCGACTGCGTTCCTCTGATTAATGATTGGGCAGCGGCAG
CCAAAAGCGTCCGTGAAGAGGTGATTGTGCTGTGCCATGGCGGGCCAATCTCTACACCGGAAGATGCGCAATACATTATG
GATCATTGCCCACAATGTGATGGTTTCTACGGCGCTAGCTCAATGGAGCGTTTACCGACAGAAATTGCCCTGACTGACAC
CACCCAAAAATTTAAAAATATAACGCGTTGA

Upstream 100 bases:

>100_bases
CTGTTTGCTCAGGCTGCCATCGAAAACTTTAAAGAAATTGTGAATAAAGAAGTTGTGAATCGTCCTTCCCATTAGGGGCA
TTTTATTTATGGAGAAGCAC

Downstream 100 bases:

>100_bases
TACTTTTTGCCAATACCAGTGGAAAGCCTGCTTTGTGAGTTTTGTCCGGTAATCGGCTAAATGAAGATGCAGGGTACGCA
AAACCGAAGTTGTTACTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MPKFQRQAILAKFREMIARREPIIGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGSLAGLLAYGNANDIVVDMAKE
VLPVVKNTPVLAGVNGTDPFCQFDHFLDHLKALGFSGVQNFPTVGLIDGNFRANLEETGMGYGLEVEMIRLAHQKDLLTT
PYVFSAEDAIAMTQAGADIIVPHMGLTTGGNIGADTALKLADCVPLINDWAAAAKSVREEVIVLCHGGPISTPEDAQYIM
DHCPQCDGFYGASSMERLPTEIALTDTTQKFKNITR

Sequences:

>Translated_276_residues
MPKFQRQAILAKFREMIARREPIIGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGSLAGLLAYGNANDIVVDMAKE
VLPVVKNTPVLAGVNGTDPFCQFDHFLDHLKALGFSGVQNFPTVGLIDGNFRANLEETGMGYGLEVEMIRLAHQKDLLTT
PYVFSAEDAIAMTQAGADIIVPHMGLTTGGNIGADTALKLADCVPLINDWAAAAKSVREEVIVLCHGGPISTPEDAQYIM
DHCPQCDGFYGASSMERLPTEIALTDTTQKFKNITR
>Mature_275_residues
PKFQRQAILAKFREMIARREPIIGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGSLAGLLAYGNANDIVVDMAKEV
LPVVKNTPVLAGVNGTDPFCQFDHFLDHLKALGFSGVQNFPTVGLIDGNFRANLEETGMGYGLEVEMIRLAHQKDLLTTP
YVFSAEDAIAMTQAGADIIVPHMGLTTGGNIGADTALKLADCVPLINDWAAAAKSVREEVIVLCHGGPISTPEDAQYIMD
HCPQCDGFYGASSMERLPTEIALTDTTQKFKNITR

Specific function: Unknown

COG id: COG5564

COG function: function code R; Predicted TIM-barrel enzyme, possibly a dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR009215 [H]

Pfam domain/function: PF09370 TIM-br_sig_trns [H]

EC number: NA

Molecular weight: Translated: 29578; Mature: 29447

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKFQRQAILAKFREMIARREPIIGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGS
CCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHCCCCEEEEEEECCCEEEECCCCC
LAGLLAYGNANDIVVDMAKEVLPVVKNTPVLAGVNGTDPFCQFDHFLDHLKALGFSGVQN
EEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC
FPTVGLIDGNFRANLEETGMGYGLEVEMIRLAHQKDLLTTPYVFSAEDAIAMTQAGADII
CCEEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCHHHHHHCCCEEE
VPHMGLTTGGNIGADTALKLADCVPLINDWAAAAKSVREEVIVLCHGGPISTPEDAQYIM
EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHH
DHCPQCDGFYGASSMERLPTEIALTDTTQKFKNITR
HHCCCCCCCCCCCHHHHCCCEEEECCCHHHHHCCCC
>Mature Secondary Structure 
PKFQRQAILAKFREMIARREPIIGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGS
CCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHCCCCEEEEEEECCCEEEECCCCC
LAGLLAYGNANDIVVDMAKEVLPVVKNTPVLAGVNGTDPFCQFDHFLDHLKALGFSGVQN
EEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC
FPTVGLIDGNFRANLEETGMGYGLEVEMIRLAHQKDLLTTPYVFSAEDAIAMTQAGADII
CCEEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCHHHHHHCCCEEE
VPHMGLTTGGNIGADTALKLADCVPLINDWAAAAKSVREEVIVLCHGGPISTPEDAQYIM
EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHH
DHCPQCDGFYGASSMERLPTEIALTDTTQKFKNITR
HHCCCCCCCCCCCHHHHCCCEEEECCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]