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The map label for this gene is glpC [H]

Identifier: 170026200

GI number: 170026200

Start: 4398350

End: 4399597

Strand: Reverse

Name: glpC [H]

Synonym: YPK_3989

Alternate gene names: 170026200

Gene position: 4399597-4398350 (Counterclockwise)

Preceding gene: 170026201

Following gene: 170026197

Centisome position: 93.82

GC content: 48.8

Gene sequence:

>1248_bases
ATGGTGGGCGATAGCCGTCTCACGCGAGATAATAGCTTCGAAAGCTGTATCAAATGTACGGTCTGTACGACTTACTGCCC
GGTGGCAAAGGTTAACCCACTCTATCCGGGGCCGAAACAAGCTGGGCCGGATGGTGAACGCCTGCGTCTGAAAGATCCGG
CACTGTACGATGATGCGCTGAAATATTGTACCAACTGTAAACGTTGTGAAGTGGCTTGCCCATCAGATGTCAAAATTGGC
GATATTATCCAACGGGCGAAAGCCAGCCATAGCACTAACAAACCCAAATTACGCGATGCCATCCTCAGTCATACCGACAT
CATGGGCACGCTTTCGACACCGTTTGCACCGGTGATCAATGCGGTGACGGGGTTGAAACCCGTTCGGGTATTGTTGGACA
AAGCGCTGAAAATTGACCATCGGCGTGAATTACCCAAATACTCATTTGGTACCTTTCGCCGTTGGTATCGCAAACAGGCG
GAAAAACAGCAGCAATATACCGAGCAAGTTGCGTTTTTCCATGGCTGTTTTGTCAACTATAACCACCCTCAATTAGGCAA
GGATTTAGTCAGCGTTTTCAATGCGATGAATATCGGTGTGCAGTTGTTGAAACGTGAAAAATGCTGTGGTGTCCCACTGA
TTGTAAATGGTTTTATTGAGCAGGCGAAAAAGCAGGCGCGGGTAAACCTGGAATCACTCACTGATACGGTCATTGGCCGT
GATATTCCGGTAGTCGCCACCTCCTCAAGTTGTACCTTCACCCTGCGGGATGAATATCCTCATTTATTAGATGTGGATAC
GACCCCGGTGCGCGATAAAGTAGAGTTGGCGACTCGCTACCTTTACCGCTTATTGGATCAAGGGCGAGAGCTACCTCTGA
AGCCTTTATTCTCATTAAACCCCTTATTGGCATCTCAAGAAGCCCCATTGCGCATTGCCTATCACACACCTTGTCATATG
GAGAAAATGGGCTGGACGGCCTATACCCTGGCTTTGCTCCAACGGATACCCGGTGTTGAGCTGGTGGTGTTAGATTCTCA
ATGTTGCGGTATCGCCGGGACCTATGGTTTTAAATCAGAAAACTACGCGACATCGCAAGGGATTGGGGCATCGTTGTTTC
AGCAAATTGAGGATAGCGGGGTTGATTTGGTGATTACCGATTGCGAAACCTGCAAATGGCAGATCGAAATGTCGACCAGT
AAGAAATGTGAGCACCCGATTACTTTACTGGCGCGGGCATTGGCTTGA

Upstream 100 bases:

>100_bases
CCAGTGCTGTGTTTGTCGCCGAACAGATTATCAGCGAGATGGCGGTGACATTATGACAGGGTTGCCAAAGCATGATGCTA
GCCCCGAACAGGATGGCACG

Downstream 100 bases:

>100_bases
TGGGGGTAAAAATTATGGTTGAGGAGATCGATAAAGCCGAGCAAGTGAATAACGCTGAATAAATTAATAATGCCGAGTAA
GCTAATAACGCTGAGTAAGT

Product: sn-glycerol-3-phosphate dehydrogenase subunit C

Products: glycerone phosphate; reduced acceptor

Alternate protein names: G-3-P dehydrogenase [H]

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MVGDSRLTRDNSFESCIKCTVCTTYCPVAKVNPLYPGPKQAGPDGERLRLKDPALYDDALKYCTNCKRCEVACPSDVKIG
DIIQRAKASHSTNKPKLRDAILSHTDIMGTLSTPFAPVINAVTGLKPVRVLLDKALKIDHRRELPKYSFGTFRRWYRKQA
EKQQQYTEQVAFFHGCFVNYNHPQLGKDLVSVFNAMNIGVQLLKREKCCGVPLIVNGFIEQAKKQARVNLESLTDTVIGR
DIPVVATSSSCTFTLRDEYPHLLDVDTTPVRDKVELATRYLYRLLDQGRELPLKPLFSLNPLLASQEAPLRIAYHTPCHM
EKMGWTAYTLALLQRIPGVELVVLDSQCCGIAGTYGFKSENYATSQGIGASLFQQIEDSGVDLVITDCETCKWQIEMSTS
KKCEHPITLLARALA

Sequences:

>Translated_415_residues
MVGDSRLTRDNSFESCIKCTVCTTYCPVAKVNPLYPGPKQAGPDGERLRLKDPALYDDALKYCTNCKRCEVACPSDVKIG
DIIQRAKASHSTNKPKLRDAILSHTDIMGTLSTPFAPVINAVTGLKPVRVLLDKALKIDHRRELPKYSFGTFRRWYRKQA
EKQQQYTEQVAFFHGCFVNYNHPQLGKDLVSVFNAMNIGVQLLKREKCCGVPLIVNGFIEQAKKQARVNLESLTDTVIGR
DIPVVATSSSCTFTLRDEYPHLLDVDTTPVRDKVELATRYLYRLLDQGRELPLKPLFSLNPLLASQEAPLRIAYHTPCHM
EKMGWTAYTLALLQRIPGVELVVLDSQCCGIAGTYGFKSENYATSQGIGASLFQQIEDSGVDLVITDCETCKWQIEMSTS
KKCEHPITLLARALA
>Mature_415_residues
MVGDSRLTRDNSFESCIKCTVCTTYCPVAKVNPLYPGPKQAGPDGERLRLKDPALYDDALKYCTNCKRCEVACPSDVKIG
DIIQRAKASHSTNKPKLRDAILSHTDIMGTLSTPFAPVINAVTGLKPVRVLLDKALKIDHRRELPKYSFGTFRRWYRKQA
EKQQQYTEQVAFFHGCFVNYNHPQLGKDLVSVFNAMNIGVQLLKREKCCGVPLIVNGFIEQAKKQARVNLESLTDTVIGR
DIPVVATSSSCTFTLRDEYPHLLDVDTTPVRDKVELATRYLYRLLDQGRELPLKPLFSLNPLLASQEAPLRIAYHTPCHM
EKMGWTAYTLALLQRIPGVELVVLDSQCCGIAGTYGFKSENYATSQGIGASLFQQIEDSGVDLVITDCETCKWQIEMSTS
KKCEHPITLLARALA

Specific function: Electron transfer protein; may also function as the membrane anchor for the glpAB dimer [H]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Note=Loosely bound to the cytoplasmic membrane often occurring in vesicles associated with fumarate reductase [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788576, Length=406, Percent_Identity=72.9064039408867, Blast_Score=639, Evalue=0.0,
Organism=Escherichia coli, GI1786497, Length=193, Percent_Identity=25.9067357512953, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR017753
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: 1.1.99.5

Molecular weight: Translated: 46398; Mature: 46398

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHC
>Mature Secondary Structure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CCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: sn-glycerol 3-phosphate; acceptor

Specific reaction: sn-glycerol 3-phosphate + acceptor = glycerone phosphate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]