| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170026180
Identifier: 170026180
GI number: 170026180
Start: 4379175
End: 4379636
Strand: Reverse
Name: 170026180
Synonym: YPK_3969
Alternate gene names: NA
Gene position: 4379636-4379175 (Counterclockwise)
Preceding gene: 170026181
Following gene: 170026173
Centisome position: 93.39
GC content: 35.71
Gene sequence:
>462_bases ATGATTGATGGCATAAGTAATAAAATGGACTTACAAGGATTATCTGCAGTTCGTTCCTTCGCTTTTTTGACAGCAGACTT AATGCTAAATATTACTAATAAAAATGGAGATAATCACGAATATAAAGTGACCAGTTCCCATGTGAATAACGATAAATTAC AAGGCCCAAAAGGAATTTTAAAAGCCACAAAAAATCACGCAGAACTCAAGAATGAAACTATTGCTTCTGGCGAAAAAAAG ACGATTAGCTTTGACAAATTGCACGTTCGAGAAATACCTGATAGAGAGCAAGCTAGCTATATCGACAATCTCAGCCTTAA CCGTAATATTTACTTAGATACCAGTGCTGATCGCGAATGTCGTATTCCCACCCAGGTTCTTAGCCCTGATCAAAACGTAG ATTCTGGTACCAAAAAACCATTTTGGATCAGTAAATACCTTTGTATTACTACGTTATATTAA
Upstream 100 bases:
>100_bases TTCCAAAAGGTAGCTTATCGATTCAATATAAAGCCTGATGCCACTCTCGTCTGTATAGGCTTAGTATCTCTCCTTCACTG CACTTTAAAAAGGATAGGTT
Downstream 100 bases:
>100_bases CTCTATTTATACCCATTATATTTCGAGTTGCCTATGCGTTGATTGCTCTGTTGCAACTCGAATTATTGAGTGTTCAGCTT ATTGATAATCTAACGATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MIDGISNKMDLQGLSAVRSFAFLTADLMLNITNKNGDNHEYKVTSSHVNNDKLQGPKGILKATKNHAELKNETIASGEKK TISFDKLHVREIPDREQASYIDNLSLNRNIYLDTSADRECRIPTQVLSPDQNVDSGTKKPFWISKYLCITTLY
Sequences:
>Translated_153_residues MIDGISNKMDLQGLSAVRSFAFLTADLMLNITNKNGDNHEYKVTSSHVNNDKLQGPKGILKATKNHAELKNETIASGEKK TISFDKLHVREIPDREQASYIDNLSLNRNIYLDTSADRECRIPTQVLSPDQNVDSGTKKPFWISKYLCITTLY >Mature_153_residues MIDGISNKMDLQGLSAVRSFAFLTADLMLNITNKNGDNHEYKVTSSHVNNDKLQGPKGILKATKNHAELKNETIASGEKK TISFDKLHVREIPDREQASYIDNLSLNRNIYLDTSADRECRIPTQVLSPDQNVDSGTKKPFWISKYLCITTLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17246; Mature: 17246
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDGISNKMDLQGLSAVRSFAFLTADLMLNITNKNGDNHEYKVTSSHVNNDKLQGPKGIL CCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCHHHH KATKNHAELKNETIASGEKKTISFDKLHVREIPDREQASYIDNLSLNRNIYLDTSADREC HHCCCHHHHCCHHHCCCCCCEEEECEEEECCCCCHHHHHHHHCCCCCCEEEEECCCCCCC RIPTQVLSPDQNVDSGTKKPFWISKYLCITTLY CCCHHHCCCCCCCCCCCCCCEEEEEEEEEEECC >Mature Secondary Structure MIDGISNKMDLQGLSAVRSFAFLTADLMLNITNKNGDNHEYKVTSSHVNNDKLQGPKGIL CCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCHHHH KATKNHAELKNETIASGEKKTISFDKLHVREIPDREQASYIDNLSLNRNIYLDTSADREC HHCCCHHHHCCHHHCCCCCCEEEECEEEECCCCCHHHHHHHHCCCCCCEEEEECCCCCCC RIPTQVLSPDQNVDSGTKKPFWISKYLCITTLY CCCHHHCCCCCCCCCCCCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA