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The map label for this gene is 170026100

Identifier: 170026100

GI number: 170026100

Start: 4287826

End: 4288476

Strand: Direct

Name: 170026100

Synonym: YPK_3887

Alternate gene names: NA

Gene position: 4287826-4288476 (Clockwise)

Preceding gene: 170026099

Following gene: 170026101

Centisome position: 91.44

GC content: 52.84

Gene sequence:

>651_bases
ATGAGGCCATGGTTGATATTTGGTGCAGGTCGTGGCGTAGGCGCACATCTGCTAGCGTTAGCAAATCAACATGCGGATTC
TGCCTCGAATCCTCGTCCTGTCACCTTGTTGATCCGTAATCAGCAGCAAGCAGAGGAATTGCGCAACAAAGGTCTGACCG
TGGTCTGCGGTGATGCTTGTGATCCGGCCAGTGTGCGCGAAGCCTGCCAACTAGCCGGTGAGGACGCCGCTATCATTTCG
ACGCTGGGTAATAACAATGCGAACTATCAGGGTAATCGGCTGATCATTGACACGGCTGAGCAACTGGGGCTGAAGCGTAT
GCTTTTGGTTACATCGATCGGTTGTGGCGATAGTTGGCCAACCCTCTCCCCTGCCGCCCGCGCAGCTTTTGGTCAGGCAG
TGCGTGAGAAATCACTGGCCGAGAGTTGGTTACAAACCAGCAACCTGATTTATACCCTGATTCGGCCGGGTGGCCTATTG
GATCAGCCCGCCACCGGTAACGCAATACGCCTGCAAACAGAAGCCCATGGCATGGTCACGCGTGCAGATGTCGCACACCA
TATAAGTCAGATGATCGAGGACCCCGCGACATATTATCAAGCTTATGCATTAATTGAGCCAGGATTAGCCCGTAAGGTAA
AAATGAATTAA

Upstream 100 bases:

>100_bases
TGGCCTTGCCGCATTCCATCAATTGGCTCAACAGCTCCTGATTGAAGACCCGACCCTGGTTAAATAACAAGACTCGTCAA
ACACAACAAGAGGAAACACC

Downstream 100 bases:

>100_bases
CAACAAATATGTCTTGATGTAATATCAAACCATGCCTGATAATGCTTATCACACTGATAGTCGTTATCATTAAGTTGTTG
GCCATATGGATAAACAGTTG

Product: NmrA family protein

Products: NA

Alternate protein names: NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family; NmrA-Like; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Epimerase; NmrA-Like Protein; Nucleoside-Diphosphate-Sugar Epimerase; DTDP-4-Dehydrorhamnose Reductase; Nmra-Like Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MRPWLIFGAGRGVGAHLLALANQHADSASNPRPVTLLIRNQQQAEELRNKGLTVVCGDACDPASVREACQLAGEDAAIIS
TLGNNNANYQGNRLIIDTAEQLGLKRMLLVTSIGCGDSWPTLSPAARAAFGQAVREKSLAESWLQTSNLIYTLIRPGGLL
DQPATGNAIRLQTEAHGMVTRADVAHHISQMIEDPATYYQAYALIEPGLARKVKMN

Sequences:

>Translated_216_residues
MRPWLIFGAGRGVGAHLLALANQHADSASNPRPVTLLIRNQQQAEELRNKGLTVVCGDACDPASVREACQLAGEDAAIIS
TLGNNNANYQGNRLIIDTAEQLGLKRMLLVTSIGCGDSWPTLSPAARAAFGQAVREKSLAESWLQTSNLIYTLIRPGGLL
DQPATGNAIRLQTEAHGMVTRADVAHHISQMIEDPATYYQAYALIEPGLARKVKMN
>Mature_216_residues
MRPWLIFGAGRGVGAHLLALANQHADSASNPRPVTLLIRNQQQAEELRNKGLTVVCGDACDPASVREACQLAGEDAAIIS
TLGNNNANYQGNRLIIDTAEQLGLKRMLLVTSIGCGDSWPTLSPAARAAFGQAVREKSLAESWLQTSNLIYTLIRPGGLL
DQPATGNAIRLQTEAHGMVTRADVAHHISQMIEDPATYYQAYALIEPGLARKVKMN

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23224; Mature: 23224

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPWLIFGAGRGVGAHLLALANQHADSASNPRPVTLLIRNQQQAEELRNKGLTVVCGDAC
CCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHCCCEEEECCCC
DPASVREACQLAGEDAAIISTLGNNNANYQGNRLIIDTAEQLGLKRMLLVTSIGCGDSWP
CHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECHHHHCHHHEEHHEECCCCCCCC
TLSPAARAAFGQAVREKSLAESWLQTSNLIYTLIRPGGLLDQPATGNAIRLQTEAHGMVT
CCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCH
RADVAHHISQMIEDPATYYQAYALIEPGLARKVKMN
HHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEECC
>Mature Secondary Structure
MRPWLIFGAGRGVGAHLLALANQHADSASNPRPVTLLIRNQQQAEELRNKGLTVVCGDAC
CCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHCCCEEEECCCC
DPASVREACQLAGEDAAIISTLGNNNANYQGNRLIIDTAEQLGLKRMLLVTSIGCGDSWP
CHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECHHHHCHHHEEHHEECCCCCCCC
TLSPAARAAFGQAVREKSLAESWLQTSNLIYTLIRPGGLLDQPATGNAIRLQTEAHGMVT
CCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCH
RADVAHHISQMIEDPATYYQAYALIEPGLARKVKMN
HHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA