The gene/protein map for NC_010465 is currently unavailable.
Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

Click here to switch to the map view.

The map label for this gene is 170026092

Identifier: 170026092

GI number: 170026092

Start: 4279606

End: 4280742

Strand: Direct

Name: 170026092

Synonym: YPK_3879

Alternate gene names: NA

Gene position: 4279606-4280742 (Clockwise)

Preceding gene: 170026091

Following gene: 170026093

Centisome position: 91.26

GC content: 53.3

Gene sequence:

>1137_bases
ATGATGACAACCCAACCGCCGGTTTATCGCCGGGAATTGTCAGGGGGCACGTTGACGGTGATACCTAACAGTAGCAATAT
CCCGCTGGATTCGCTCTTTGATATTGCCGAACGCCGTAACCCTAAGCGCGCCTTCCTTTTTGTTAGCAAAGTTCTGGGGC
GGCACATCCCTGTTAGCCCTGCCACCATGCGCAATGTCTATCGCCAGTTGGCGGAGAGATTTCCCGCAGACCTACCAGGC
CCCGTTCTGTTTATTGGCATGGCTGAAACTGCAGTAGGTCTGGCTGCTGGTGTATTTCAAGAGCTACGCGGCACGGTCGC
TGAACCGGTTTTTTTGACGTCAACCCGGCATCCGGTTGATGGCGATTTGCTGTGCGAATTCAAAGAAAACCATAGCCATG
CAACGGATCACCTGCTCTATTTGCCGTCTGACCCCGTGTTGCGCGCACGCCTGCAACGCGCCCGTTCAGTGGTTCTTATT
GACGATGAGGCCACCACGGGGAACACCTTTATCAACCTTCTTCAGGCATTACGTGATGCCAATCTGAATGGCCTTGAAAA
GGTGGTTGCCGTCACCCTGACCGACTGGAGCGGTAGCGCACTGACGGAACGGTGCCCTTTGCCAGTCACCACCGTTTCAC
TTATCACCGGGGAGTGGAACTGGTCACCCATCCCTGATGCCCCGGTGCCCGTGATGCCCGCCTGTAATGTCACTGCCCGT
GGCAAGGTTGCCATCACCGATAAACAAAATTGGGGCCGGCTCGGCATGGATGAAACCCGTGCTGATATCGGCCATAAGGT
CCATGTACTGGCCGGTGAAAAAGTGCTGGTCCTTGGTACCAGTGAGTTTGTCTGGCAACCTTTCTTATTGGCTGAGAGGC
TGGAACATGCCGGGGCTAACGTCAAATTTAGCTCGATAACCCGCTCACCGATTGCACAAGGCCATGCTATTAACTCAATC
ATCGCGTTCAGCGATAACTACGGTCTAGGGATCCCCAATTTCCTCTATAACGTCGCTCATCAGCATTTTGATCGCATTAT
CGTTTGTGTCGAAACACCAGCCGAATCTATTGATCCCACGCTGATTGAACAGCTTCGCACGGTGGCACCTTGTGTGGAGG
TTATTGCTTATGAATAA

Upstream 100 bases:

>100_bases
CGGTTGCACATTTTAAGCCTGTCAGCGTGAGAGCGATGACCGATGCACTGCCGTTCCCCGCTGAATTGCAAAATCTTACT
CATTTCTAAAAAGGACAGTC

Downstream 100 bases:

>100_bases
GCCTGTTTTTTTGTGTGATCTGGACGATACGCTATTCCAGACACGGCGCAAAATGGTCGATGAGCTAGACCTTCCTCCTT
TTCGGGTAGGGGCGTTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MMTTQPPVYRRELSGGTLTVIPNSSNIPLDSLFDIAERRNPKRAFLFVSKVLGRHIPVSPATMRNVYRQLAERFPADLPG
PVLFIGMAETAVGLAAGVFQELRGTVAEPVFLTSTRHPVDGDLLCEFKENHSHATDHLLYLPSDPVLRARLQRARSVVLI
DDEATTGNTFINLLQALRDANLNGLEKVVAVTLTDWSGSALTERCPLPVTTVSLITGEWNWSPIPDAPVPVMPACNVTAR
GKVAITDKQNWGRLGMDETRADIGHKVHVLAGEKVLVLGTSEFVWQPFLLAERLEHAGANVKFSSITRSPIAQGHAINSI
IAFSDNYGLGIPNFLYNVAHQHFDRIIVCVETPAESIDPTLIEQLRTVAPCVEVIAYE

Sequences:

>Translated_378_residues
MMTTQPPVYRRELSGGTLTVIPNSSNIPLDSLFDIAERRNPKRAFLFVSKVLGRHIPVSPATMRNVYRQLAERFPADLPG
PVLFIGMAETAVGLAAGVFQELRGTVAEPVFLTSTRHPVDGDLLCEFKENHSHATDHLLYLPSDPVLRARLQRARSVVLI
DDEATTGNTFINLLQALRDANLNGLEKVVAVTLTDWSGSALTERCPLPVTTVSLITGEWNWSPIPDAPVPVMPACNVTAR
GKVAITDKQNWGRLGMDETRADIGHKVHVLAGEKVLVLGTSEFVWQPFLLAERLEHAGANVKFSSITRSPIAQGHAINSI
IAFSDNYGLGIPNFLYNVAHQHFDRIIVCVETPAESIDPTLIEQLRTVAPCVEVIAYE
>Mature_378_residues
MMTTQPPVYRRELSGGTLTVIPNSSNIPLDSLFDIAERRNPKRAFLFVSKVLGRHIPVSPATMRNVYRQLAERFPADLPG
PVLFIGMAETAVGLAAGVFQELRGTVAEPVFLTSTRHPVDGDLLCEFKENHSHATDHLLYLPSDPVLRARLQRARSVVLI
DDEATTGNTFINLLQALRDANLNGLEKVVAVTLTDWSGSALTERCPLPVTTVSLITGEWNWSPIPDAPVPVMPACNVTAR
GKVAITDKQNWGRLGMDETRADIGHKVHVLAGEKVLVLGTSEFVWQPFLLAERLEHAGANVKFSSITRSPIAQGHAINSI
IAFSDNYGLGIPNFLYNVAHQHFDRIIVCVETPAESIDPTLIEQLRTVAPCVEVIAYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41477; Mature: 41477

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTTQPPVYRRELSGGTLTVIPNSSNIPLDSLFDIAERRNPKRAFLFVSKVLGRHIPVSP
CCCCCCCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCH
ATMRNVYRQLAERFPADLPGPVLFIGMAETAVGLAAGVFQELRGTVAEPVFLTSTRHPVD
HHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
GDLLCEFKENHSHATDHLLYLPSDPVLRARLQRARSVVLIDDEATTGNTFINLLQALRDA
CCEEEEECCCCCCCCCEEEECCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCC
NLNGLEKVVAVTLTDWSGSALTERCPLPVTTVSLITGEWNWSPIPDAPVPVMPACNVTAR
CCCCCCEEEEEEEECCCCCCHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
GKVAITDKQNWGRLGMDETRADIGHKVHVLAGEKVLVLGTSEFVWQPFLLAERLEHAGAN
CEEEEECCCCCCCCCCCHHHHHCCCEEEEEECCEEEEEECHHHHHHHHHHHHHHHHCCCC
VKFSSITRSPIAQGHAINSIIAFSDNYGLGIPNFLYNVAHQHFDRIIVCVETPAESIDPT
EEECCCCCCCHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCHH
LIEQLRTVAPCVEVIAYE
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMTTQPPVYRRELSGGTLTVIPNSSNIPLDSLFDIAERRNPKRAFLFVSKVLGRHIPVSP
CCCCCCCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCH
ATMRNVYRQLAERFPADLPGPVLFIGMAETAVGLAAGVFQELRGTVAEPVFLTSTRHPVD
HHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
GDLLCEFKENHSHATDHLLYLPSDPVLRARLQRARSVVLIDDEATTGNTFINLLQALRDA
CCEEEEECCCCCCCCCEEEECCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCC
NLNGLEKVVAVTLTDWSGSALTERCPLPVTTVSLITGEWNWSPIPDAPVPVMPACNVTAR
CCCCCCEEEEEEEECCCCCCHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
GKVAITDKQNWGRLGMDETRADIGHKVHVLAGEKVLVLGTSEFVWQPFLLAERLEHAGAN
CEEEEECCCCCCCCCCCHHHHHCCCEEEEEECCEEEEEECHHHHHHHHHHHHHHHHCCCC
VKFSSITRSPIAQGHAINSIIAFSDNYGLGIPNFLYNVAHQHFDRIIVCVETPAESIDPT
EEECCCCCCCHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCHH
LIEQLRTVAPCVEVIAYE
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA