| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is yjjX [C]
Identifier: 170025826
GI number: 170025826
Start: 3981614
End: 3982156
Strand: Direct
Name: yjjX [C]
Synonym: YPK_3611
Alternate gene names: 170025826
Gene position: 3981614-3982156 (Clockwise)
Preceding gene: 170025824
Following gene: 170025829
Centisome position: 84.91
GC content: 49.54
Gene sequence:
>543_bases ATGTACCATGTTATCGCTGCAACTACCAATCCTGCGAAAATTAACGCTATTACCCTCGCCTTTGACGATGTTTACGGCCC TGGCCAATATCGCATTGAAGGTGTCAATGTCGACAGCGGTGTTCCCCTGCAACCCATAGGCAGCACTGAGACACGTATTG GTGCCCGTCAACGGGTTAAGAACGCGCGCCAGGTTCGCCCGGAGGCTGATTTTTGGGTTGGGATTGAAGCAGGCATTGAA GATAATATGACCTTTGCATGGATGGTAATTGAACACTTACAAGCACGGGGAGAATCCCGTTCTGCCAGTTTAATGCTGCC TGACATTATACTACAAGGGATCCGACAAGGACGTGAACTGGGCGACGAAATGGCGGTTTTAAGCGGTATTTCGAATGTAA AACAGCAAGGCGGCGCAATCGGGATTTTTACCCAAGGTAAATTAACTCGAACCAGTGTCTATCACCAGGCCCTCTTGTTG GCACTGGTGCCGTTCCACAATGAGATTTACCAACGCCCATCGCCCTCTAAACCAGCCATTTAG
Upstream 100 bases:
>100_bases CCGTTATACTGCGTAAAATAAGCACAAAACCTATCTGAGATAAAACCTATCTGAGATAAAACCTATTTTAGATAGGCTTT AAAGGATATTCATACTCATT
Downstream 100 bases:
>100_bases CGTTTGTTGGCTAGCAACTGGGCTTCGAGCCAGCTTTTCAGCTGTGGTGGGGCCGTTTTCAAGCTATTAGAGCCACGGGT GATCGTCGCAATACCTGCAC
Product: NTPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MYHVIAATTNPAKINAITLAFDDVYGPGQYRIEGVNVDSGVPLQPIGSTETRIGARQRVKNARQVRPEADFWVGIEAGIE DNMTFAWMVIEHLQARGESRSASLMLPDIILQGIRQGRELGDEMAVLSGISNVKQQGGAIGIFTQGKLTRTSVYHQALLL ALVPFHNEIYQRPSPSKPAI
Sequences:
>Translated_180_residues MYHVIAATTNPAKINAITLAFDDVYGPGQYRIEGVNVDSGVPLQPIGSTETRIGARQRVKNARQVRPEADFWVGIEAGIE DNMTFAWMVIEHLQARGESRSASLMLPDIILQGIRQGRELGDEMAVLSGISNVKQQGGAIGIFTQGKLTRTSVYHQALLL ALVPFHNEIYQRPSPSKPAI >Mature_180_residues MYHVIAATTNPAKINAITLAFDDVYGPGQYRIEGVNVDSGVPLQPIGSTETRIGARQRVKNARQVRPEADFWVGIEAGIE DNMTFAWMVIEHLQARGESRSASLMLPDIILQGIRQGRELGDEMAVLSGISNVKQQGGAIGIFTQGKLTRTSVYHQALLL ALVPFHNEIYQRPSPSKPAI
Specific function: Unknown
COG id: COG1986
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0244 family [H]
Homologues:
Organism=Escherichia coli, GI87082442, Length=170, Percent_Identity=58.2352941176471, Blast_Score=209, Evalue=6e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002786 [H]
Pfam domain/function: PF01931 DUF84 [H]
EC number: NA
Molecular weight: Translated: 19709; Mature: 19709
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHVIAATTNPAKINAITLAFDDVYGPGQYRIEGVNVDSGVPLQPIGSTETRIGARQRVK CEEEEEECCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH NARQVRPEADFWVGIEAGIEDNMTFAWMVIEHLQARGESRSASLMLPDIILQGIRQGREL HHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHH GDEMAVLSGISNVKQQGGAIGIFTQGKLTRTSVYHQALLLALVPFHNEIYQRPSPSKPAI HHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MYHVIAATTNPAKINAITLAFDDVYGPGQYRIEGVNVDSGVPLQPIGSTETRIGARQRVK CEEEEEECCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH NARQVRPEADFWVGIEAGIEDNMTFAWMVIEHLQARGESRSASLMLPDIILQGIRQGREL HHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHH GDEMAVLSGISNVKQQGGAIGIFTQGKLTRTSVYHQALLLALVPFHNEIYQRPSPSKPAI HHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA