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The map label for this gene is yaaA [C]

Identifier: 170025815

GI number: 170025815

Start: 3971031

End: 3971807

Strand: Direct

Name: yaaA [C]

Synonym: YPK_3600

Alternate gene names: 170025815

Gene position: 3971031-3971807 (Clockwise)

Preceding gene: 170025811

Following gene: 170025821

Centisome position: 84.68

GC content: 44.02

Gene sequence:

>777_bases
ATGCTTATTATTATCTCCCCGGCCAAAACGCTTGATTATCAAAGCCCCTTAGCGACAACGAAATTTAGCCAACCAGAAAT
GTTGGATAAATCACAAGCATTGATTGAGATATGCCGCGAGCTAACCCCGGCTCAAATCAGCAGCCTGATGGGGATTAGCG
ATAAACTGGCAGGTTTAAATGCCGCTCGATTCAGTGAATGGCAGCCTGATTTCACACCCGCAAATGCGCGTCAGGCTATT
CTGGCTTTTAAAGGTGACGTCTATACCGGGATGCAGGCCGAAAGTTTCAGTGAAGCTGATTTTGACTTTGCACAACAGCA
TTTGCGTATGTTGTCAGGTTTATACGGTCTGCTGCGCCCGCTAGATTTAATGCAACCTTATCGTTTAGAAATGGGGACTA
AGCTGGCTAACCCACGCGGCAAAGATCTTTATGCCTTTTGGGGCGATCAGATAACCGAGAAACTTAATCAGGCGCTGGAA
CTGCAAGGCGATAATATTCTGATTAATTTGGCGTCCGATGAGTATTTTAAGGCTGTTAAACCCGCTAAATTAAGCGGTTC
ACTGATTAAACCGGTATTTTTGGATGAGAAAAACGGTAAGTACAAAATAATCAGTTTCTACGCGAAGAAAGCCCGTGGCC
TGATGAGCCGCTTTATTATTCAGAATAAGTTAACCAAACCAGAGCAATTGGTTGATTTTAATCTGGAAGGCTATGAATTT
GATGCGGGATTATCGGCGAAAAACGAACTCGTGTTTAAACGGGCTGAACAGCACTAA

Upstream 100 bases:

>100_bases
CGAACCCTAGCGCACTGACGTCAGTCAAGTGATAGGGCTAAACGAAGGCCGCCAAACGCATATGCAGCTTGAAGTATGAC
GGTATAAATAGGATGTCATG

Downstream 100 bases:

>100_bases
AATATGTCTGTAAGTGACACCATAAGCCCACGAGCCTGCTTTTTACTTGAACGAGACCGTGGGCAAAGAACTAAAGATTG
AGGTTATTGACAACGTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MLIIISPAKTLDYQSPLATTKFSQPEMLDKSQALIEICRELTPAQISSLMGISDKLAGLNAARFSEWQPDFTPANARQAI
LAFKGDVYTGMQAESFSEADFDFAQQHLRMLSGLYGLLRPLDLMQPYRLEMGTKLANPRGKDLYAFWGDQITEKLNQALE
LQGDNILINLASDEYFKAVKPAKLSGSLIKPVFLDEKNGKYKIISFYAKKARGLMSRFIIQNKLTKPEQLVDFNLEGYEF
DAGLSAKNELVFKRAEQH

Sequences:

>Translated_258_residues
MLIIISPAKTLDYQSPLATTKFSQPEMLDKSQALIEICRELTPAQISSLMGISDKLAGLNAARFSEWQPDFTPANARQAI
LAFKGDVYTGMQAESFSEADFDFAQQHLRMLSGLYGLLRPLDLMQPYRLEMGTKLANPRGKDLYAFWGDQITEKLNQALE
LQGDNILINLASDEYFKAVKPAKLSGSLIKPVFLDEKNGKYKIISFYAKKARGLMSRFIIQNKLTKPEQLVDFNLEGYEF
DAGLSAKNELVFKRAEQH
>Mature_258_residues
MLIIISPAKTLDYQSPLATTKFSQPEMLDKSQALIEICRELTPAQISSLMGISDKLAGLNAARFSEWQPDFTPANARQAI
LAFKGDVYTGMQAESFSEADFDFAQQHLRMLSGLYGLLRPLDLMQPYRLEMGTKLANPRGKDLYAFWGDQITEKLNQALE
LQGDNILINLASDEYFKAVKPAKLSGSLIKPVFLDEKNGKYKIISFYAKKARGLMSRFIIQNKLTKPEQLVDFNLEGYEF
DAGLSAKNELVFKRAEQH

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family

Homologues:

Organism=Escherichia coli, GI1786187, Length=258, Percent_Identity=78.2945736434108, Blast_Score=422, Evalue=1e-119,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y334_YERPN (Q1CMW4)

Other databases:

- EMBL:   CP000305
- EMBL:   ACNQ01000006
- RefSeq:   YP_646266.1
- STRING:   Q1CMW4
- GeneID:   4126228
- GenomeReviews:   CP000305_GR
- KEGG:   ypn:YPN_0334
- eggNOG:   COG3022
- HOGENOM:   HBG672409
- OMA:   ISFYAKR
- ProtClustDB:   PRK02101
- BioCyc:   YPES377628:YPN_0334-MONOMER
- HAMAP:   MF_00652
- InterPro:   IPR005583

Pfam domain/function: PF03883 DUF328

EC number: NA

Molecular weight: Translated: 29073; Mature: 29073

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIIISPAKTLDYQSPLATTKFSQPEMLDKSQALIEICRELTPAQISSLMGISDKLAGLN
CEEEECCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHCCC
AARFSEWQPDFTPANARQAILAFKGDVYTGMQAESFSEADFDFAQQHLRMLSGLYGLLRP
HHHHCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LDLMQPYRLEMGTKLANPRGKDLYAFWGDQITEKLNQALELQGDNILINLASDEYFKAVK
HHHCCCHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCC
PAKLSGSLIKPVFLDEKNGKYKIISFYAKKARGLMSRFIIQNKLTKPEQLVDFNLEGYEF
CCCCCCCEECCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEE
DAGLSAKNELVFKRAEQH
CCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MLIIISPAKTLDYQSPLATTKFSQPEMLDKSQALIEICRELTPAQISSLMGISDKLAGLN
CEEEECCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHCCC
AARFSEWQPDFTPANARQAILAFKGDVYTGMQAESFSEADFDFAQQHLRMLSGLYGLLRP
HHHHCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LDLMQPYRLEMGTKLANPRGKDLYAFWGDQITEKLNQALELQGDNILINLASDEYFKAVK
HHHCCCHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCC
PAKLSGSLIKPVFLDEKNGKYKIISFYAKKARGLMSRFIIQNKLTKPEQLVDFNLEGYEF
CCCCCCCEECCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEE
DAGLSAKNELVFKRAEQH
CCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA