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The map label for this gene is yafE [H]

Identifier: 170025501

GI number: 170025501

Start: 3594973

End: 3595494

Strand: Reverse

Name: yafE [H]

Synonym: YPK_3284

Alternate gene names: 170025501

Gene position: 3595494-3594973 (Counterclockwise)

Preceding gene: 170025502

Following gene: 170025500

Centisome position: 76.67

GC content: 42.72

Gene sequence:

>522_bases
ATGCAGGCCGCAGCAGATAAAAAACTCACTAATATTGAGATACAACAAGGGCTGGCTGAATCATTGCCTTTTGCTGATCA
AAGCTTTGATATTGTTATCAGCCGTTATTCTGCACACCATTGGCACGATGTTGGGAAAGCTTTACGTGAAGTTAAGCGGG
TATTACGGCCCGGTGGAAAAGTCATCTTCATGGATGTGGTTTCTCCCGGACATCCGGTATTGGATATCTATTTGCAAACA
GTAGAAGTCTTACGTGATACCTCGCATGTGCGAAATTACTCTCCTGGAGAATGGCTATCTTTATTTACCGAGGGTGGGTT
AGTAATAAATGAAGTAACTTCTGACCGCTTGTATTTGGAGTTCAGCAGTTGGATTGCCAGAATGCGTACACCTGTACATT
TTGCTACGGCTATTCGCGAGTTACAAAAGTTAGCATCTGACGGTGTCATTAATCACTATGCTATTCAGGCTGATGGTTCC
TTTACCAGCGATATCATGATGATTGTTGCAGTAAGAGACTAA

Upstream 100 bases:

>100_bases
ACGGTCATTGCTTCACATTCTCTGGTCACTGGATAGCACGGTAAAAAATCAAAACCATGTCGTATCCTATGATCTCTCCG
CTCAAATATTACAGGTTGTC

Downstream 100 bases:

>100_bases
TAAACAATAAGTGTGGATGGTGGTAATAATATATCAATATTCACATTTAGATTTATATAAATATATTTTTATTATGGATA
ATGAGATTATATCCTTTTTA

Product: type 11 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MQAAADKKLTNIEIQQGLAESLPFADQSFDIVISRYSAHHWHDVGKALREVKRVLRPGGKVIFMDVVSPGHPVLDIYLQT
VEVLRDTSHVRNYSPGEWLSLFTEGGLVINEVTSDRLYLEFSSWIARMRTPVHFATAIRELQKLASDGVINHYAIQADGS
FTSDIMMIVAVRD

Sequences:

>Translated_173_residues
MQAAADKKLTNIEIQQGLAESLPFADQSFDIVISRYSAHHWHDVGKALREVKRVLRPGGKVIFMDVVSPGHPVLDIYLQT
VEVLRDTSHVRNYSPGEWLSLFTEGGLVINEVTSDRLYLEFSSWIARMRTPVHFATAIRELQKLASDGVINHYAIQADGS
FTSDIMMIVAVRD
>Mature_173_residues
MQAAADKKLTNIEIQQGLAESLPFADQSFDIVISRYSAHHWHDVGKALREVKRVLRPGGKVIFMDVVSPGHPVLDIYLQT
VEVLRDTSHVRNYSPGEWLSLFTEGGLVINEVTSDRLYLEFSSWIARMRTPVHFATAIRELQKLASDGVINHYAIQADGS
FTSDIMMIVAVRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786404, Length=169, Percent_Identity=64.4970414201183, Blast_Score=234, Evalue=3e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 19452; Mature: 19452

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAAADKKLTNIEIQQGLAESLPFADQSFDIVISRYSAHHWHDVGKALREVKRVLRPGGK
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHEEEHHCCHHHHHHHHHHHHHHHHHCCCCC
VIFMDVVSPGHPVLDIYLQTVEVLRDTSHVRNYSPGEWLSLFTEGGLVINEVTSDRLYLE
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCCEEEEH
FSSWIARMRTPVHFATAIRELQKLASDGVINHYAIQADGSFTSDIMMIVAVRD
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEECC
>Mature Secondary Structure
MQAAADKKLTNIEIQQGLAESLPFADQSFDIVISRYSAHHWHDVGKALREVKRVLRPGGK
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHEEEHHCCHHHHHHHHHHHHHHHHHCCCCC
VIFMDVVSPGHPVLDIYLQTVEVLRDTSHVRNYSPGEWLSLFTEGGLVINEVTSDRLYLE
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCCEEEEH
FSSWIARMRTPVHFATAIRELQKLASDGVINHYAIQADGSFTSDIMMIVAVRD
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1663890; 9278503 [H]