| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is aroL
Identifier: 170025499
GI number: 170025499
Start: 3592914
End: 3593438
Strand: Reverse
Name: aroL
Synonym: YPK_3282
Alternate gene names: 170025499
Gene position: 3593438-3592914 (Counterclockwise)
Preceding gene: 170025500
Following gene: 170025498
Centisome position: 76.63
GC content: 49.14
Gene sequence:
>525_bases ATGACACAAACTATCTTCATGGTAGGCGCGCGCGGTGCGGGTAAGACCACTATTGGGAAGGCATTGGCGCAGGCATTGGG GTATCGGTTTGTTGATACAGATCTATTTATGCAACAAACCTCACAAATGACCGTGGCTGAAGTTGTTGAGAGTGAAGGTT GGGATGGTTTTCGTCTACGTGAAAGCATGGCACTACAGGCAGTAACGGCACCTAAAACAGTCATTGCCACTGGTGGTGGT GCGGTACTGTCCAGTGAAAACCGTGCATTCATGCGTGATCATGGGCGAGTTATTTATCTGCGGGCATCAGCAGCCGTATT GGCAAAGCGGCTAGCAGAAGATCCTGAAGAGGCTCAGCGGCCAAGTTTAACCGGTAAACCCATCGTTGAAGAAATGCTGG ATGTGTTGGCTAGCCGTGAAGCATTGTATCAGGACGTCGCCCATCATGTACTTGATGGAACGCAAACTCCGTCGCTGGTT GTCGAACAAATTTTACAGATGTTGACTGGTGAGATGGTCAAATAA
Upstream 100 bases:
>100_bases TGAACCGCGTAGTAAACCTGTTCAACCGGCCAATAATAACGGTCGGTTTTTTGATGTCGAAAATTTATCCTCAGAAGTTG ATACAAAGGACTTTCAAGTA
Downstream 100 bases:
>100_bases TGAAGAAAAGGGGGTTTGATTGGTAATGTGTGTAATGTGTGTAATGTGTGGGCGAGTCTGACTGATTGCTAATTAATTAT GCAGTATACAATTGTCACCT
Product: shikimate kinase II
Products: NA
Alternate protein names: SK 2
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTQTIFMVGARGAGKTTIGKALAQALGYRFVDTDLFMQQTSQMTVAEVVESEGWDGFRLRESMALQAVTAPKTVIATGGG AVLSSENRAFMRDHGRVIYLRASAAVLAKRLAEDPEEAQRPSLTGKPIVEEMLDVLASREALYQDVAHHVLDGTQTPSLV VEQILQMLTGEMVK
Sequences:
>Translated_174_residues MTQTIFMVGARGAGKTTIGKALAQALGYRFVDTDLFMQQTSQMTVAEVVESEGWDGFRLRESMALQAVTAPKTVIATGGG AVLSSENRAFMRDHGRVIYLRASAAVLAKRLAEDPEEAQRPSLTGKPIVEEMLDVLASREALYQDVAHHVLDGTQTPSLV VEQILQMLTGEMVK >Mature_173_residues TQTIFMVGARGAGKTTIGKALAQALGYRFVDTDLFMQQTSQMTVAEVVESEGWDGFRLRESMALQAVTAPKTVIATGGGA VLSSENRAFMRDHGRVIYLRASAAVLAKRLAEDPEEAQRPSLTGKPIVEEMLDVLASREALYQDVAHHVLDGTQTPSLVV EQILQMLTGEMVK
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family. AroL subfamily
Homologues:
Organism=Escherichia coli, GI1786587, Length=164, Percent_Identity=56.7073170731707, Blast_Score=196, Evalue=1e-51, Organism=Escherichia coli, GI87082255, Length=169, Percent_Identity=36.6863905325444, Blast_Score=96, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6320332, Length=155, Percent_Identity=34.8387096774194, Blast_Score=78, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROL_YERP3 (A7FLH5)
Other databases:
- EMBL: CP000720 - RefSeq: YP_001402103.1 - ProteinModelPortal: A7FLH5 - SMR: A7FLH5 - STRING: A7FLH5 - GeneID: 5386232 - GenomeReviews: CP000720_GR - KEGG: ypi:YpsIP31758_3143 - NMPDR: fig|349747.3.peg.3565 - eggNOG: COG0703 - HOGENOM: HBG335815 - OMA: GGMVLAE - ProtClustDB: PRK03731 - BioCyc: YPSE349747:YPSIP31758_3143-MONOMER - GO: GO:0005737 - HAMAP: MF_01269 - InterPro: IPR000623 - InterPro: IPR023000 - PRINTS: PR01100
Pfam domain/function: PF01202 SKI
EC number: =2.7.1.71
Molecular weight: Translated: 18896; Mature: 18765
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: BINDING 34-34 BINDING 58-58 BINDING 79-79 BINDING 120-120 BINDING 139-139 BINDING 155-155
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTIFMVGARGAGKTTIGKALAQALGYRFVDTDLFMQQTSQMTVAEVVESEGWDGFRLR CCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ESMALQAVTAPKTVIATGGGAVLSSENRAFMRDHGRVIYLRASAAVLAKRLAEDPEEAQR HHHHHHHHCCCCEEEEECCCEEEECCCCHHHHCCCCEEEEECHHHHHHHHHHCCHHHHHC PSLTGKPIVEEMLDVLASREALYQDVAHHVLDGTQTPSLVVEQILQMLTGEMVK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQTIFMVGARGAGKTTIGKALAQALGYRFVDTDLFMQQTSQMTVAEVVESEGWDGFRLR CCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ESMALQAVTAPKTVIATGGGAVLSSENRAFMRDHGRVIYLRASAAVLAKRLAEDPEEAQR HHHHHHHHCCCCEEEEECCCEEEECCCCHHHHCCCCEEEEECHHHHHHHHHHCCHHHHHC PSLTGKPIVEEMLDVLASREALYQDVAHHVLDGTQTPSLVVEQILQMLTGEMVK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA