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The map label for this gene is ybaZ [H]

Identifier: 170025432

GI number: 170025432

Start: 3515794

End: 3516357

Strand: Direct

Name: ybaZ [H]

Synonym: YPK_3215

Alternate gene names: 170025432

Gene position: 3515794-3516357 (Clockwise)

Preceding gene: 170025431

Following gene: 170025434

Centisome position: 74.97

GC content: 48.76

Gene sequence:

>564_bases
ATGGTTTCTTGCCCAGTAAATGCTCACATCAAGCTAAATCTATTTTCCACTGGCATAAAATCCCCCATAGTGCAGGGTAT
CCATATTGCGGTGAGCGACAACATTGCGGTAAACAACAACATTGCGGTGAGCGACAACAGGCCACGCAAGTCATCGGTTA
AAAGAGAGAATGCTGTGTCACCTCCAGAAAGCCGTCATTCAGATCAGGATGAATACCAAGAGCCCGATTATACCGCAGAG
CAAAATACACCGCCGGTAGCCGATAGCTTTCGTCAGCGGGTATTCCATGTGGTTGCGGCTATCCCCTATGGGCAGGTAGC
GACCTATGGTGATATAGCGCAGCTAATTGGTTCTCCAAGAGCGGCCAGGCAAGTTGGCGGTGTGCTAAAGCGCTTACCAG
AAGGGTCTGCACTACCTTGGCACCGGGTAATTAATCGATATGGTGAGATATCATTAACAGGCGATGATTATCTCAGGCAA
AAAAAGGCGCTCGTGGCGGAAGGTATTTGTATTGATGCTGCTGGCCGAATTAATTTGCAGCAATATCGCTGGCGATACAG
CTAG

Upstream 100 bases:

>100_bases
ACCAACAGGGCCTCCATTGATATTAACGGCCCCTGCATTCTGGAGCGGTGGGCATTATTGACCATGCCCTGCAAAATAGC
AAGACAACACGCGCTAACCG

Downstream 100 bases:

>100_bases
TGCGATGTGATAGCTGATATACCCAACGTAATTGGCGTTGCATACAGCACAACCCGCGGGCTCCAATGAACTGACCCACG
CCAGTTATTAGAGCGGGATC

Product: methylated-DNA--protein-cysteine methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MVSCPVNAHIKLNLFSTGIKSPIVQGIHIAVSDNIAVNNNIAVSDNRPRKSSVKRENAVSPPESRHSDQDEYQEPDYTAE
QNTPPVADSFRQRVFHVVAAIPYGQVATYGDIAQLIGSPRAARQVGGVLKRLPEGSALPWHRVINRYGEISLTGDDYLRQ
KKALVAEGICIDAAGRINLQQYRWRYS

Sequences:

>Translated_187_residues
MVSCPVNAHIKLNLFSTGIKSPIVQGIHIAVSDNIAVNNNIAVSDNRPRKSSVKRENAVSPPESRHSDQDEYQEPDYTAE
QNTPPVADSFRQRVFHVVAAIPYGQVATYGDIAQLIGSPRAARQVGGVLKRLPEGSALPWHRVINRYGEISLTGDDYLRQ
KKALVAEGICIDAAGRINLQQYRWRYS
>Mature_187_residues
MVSCPVNAHIKLNLFSTGIKSPIVQGIHIAVSDNIAVNNNIAVSDNRPRKSSVKRENAVSPPESRHSDQDEYQEPDYTAE
QNTPPVADSFRQRVFHVVAAIPYGQVATYGDIAQLIGSPRAARQVGGVLKRLPEGSALPWHRVINRYGEISLTGDDYLRQ
KKALVAEGICIDAAGRINLQQYRWRYS

Specific function: Unknown

COG id: COG3695

COG function: function code L; Predicted methylated DNA-protein cysteine methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MGMT family [H]

Homologues:

Organism=Escherichia coli, GI1786659, Length=115, Percent_Identity=62.6086956521739, Blast_Score=151, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014048
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01035 DNA_binding_1 [H]

EC number: NA

Molecular weight: Translated: 20705; Mature: 20705

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSCPVNAHIKLNLFSTGIKSPIVQGIHIAVSDNIAVNNNIAVSDNRPRKSSVKRENAVS
CCCCCCCCEEEEEEECCCCCCHHHCCEEEEEECCEEECCCEEECCCCCCHHHHHHHCCCC
PPESRHSDQDEYQEPDYTAEQNTPPVADSFRQRVFHVVAAIPYGQVATYGDIAQLIGSPR
CCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCH
AARQVGGVLKRLPEGSALPWHRVINRYGEISLTGDDYLRQKKALVAEGICIDAAGRINLQ
HHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEECCHHHHHHHHHHHHCCEEEECCCCCCHH
QYRWRYS
HHEEECC
>Mature Secondary Structure
MVSCPVNAHIKLNLFSTGIKSPIVQGIHIAVSDNIAVNNNIAVSDNRPRKSSVKRENAVS
CCCCCCCCEEEEEEECCCCCCHHHCCEEEEEECCEEECCCEEECCCCCCHHHHHHHCCCC
PPESRHSDQDEYQEPDYTAEQNTPPVADSFRQRVFHVVAAIPYGQVATYGDIAQLIGSPR
CCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCH
AARQVGGVLKRLPEGSALPWHRVINRYGEISLTGDDYLRQKKALVAEGICIDAAGRINLQ
HHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEECCHHHHHHHHHHHHCCEEEECCCCCCHH
QYRWRYS
HHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]