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The map label for this gene is recR [H]

Identifier: 170025413

GI number: 170025413

Start: 3496377

End: 3496952

Strand: Reverse

Name: recR [H]

Synonym: YPK_3196

Alternate gene names: 170025413

Gene position: 3496952-3496377 (Counterclockwise)

Preceding gene: 170025414

Following gene: 170025412

Centisome position: 74.57

GC content: 51.91

Gene sequence:

>576_bases
ATGGAGGCGTTGCGTTGTTTACCGGGTGTTGGCCCGAAATCGGCGCAACGTATGGCATTTCAGCTATTACAGCGCGATCG
TAGTGGTGGAATGCGCCTGGCGCAGGCTCTGACTCGGGCAATGTCTGAAATAGGCCATTGTGCAGATTGTCGTACATTTA
CCGAGCAAGAGCACTGCACCATCTGCTTGAATCCCCGCCGTCAACAAAATGGTCAAATCTGTGTGGTCGAAAGCCCGGCA
GATATCCATGCCATTGAGCAAACTGGCCAGTTTGGCGGGCGTTATTTTGTGCTGATGGGGCATTTATCACCGATGGATGG
TATTGGCCCTGGTGATATAGGGCTAGATCTACTGGAGAAACGGCTTTCTACTGAGGCTATCAGTGAGGTCATTTTAGCCA
CGAATCCAACCGTTGAAGGGGATGCAACAGCCAACTATATCGGCCAGATGTGTGGCCAATATGGCATACTGGCCAGCCGC
ATCGCCCATGGCGTTCCTGTTGGTGGCGAGTTAGAAATGGTTGATGGCACCACGTTATCTCACTCGTTAGCAGGGCGTAA
TCCCATCAAGTACTGA

Upstream 100 bases:

>100_bases
CACAAAAAGAGAAAATGGCCTCTGTATCCAATGGGATGCAATTGCCACCAGGCTTTAAGATGCCGTTCTGATGCAAACCA
GTCCACTCCTGGAGTCATTA

Downstream 100 bases:

>100_bases
TCGTATTCCTGACCGTGGGCGATGACCTTATTATTGATTATCTTACGGATAATTTTATTCAGAATAATAAATCAATCGCC
CCCGATTCTCTGTTTTTTCT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEHCTICLNPRRQQNGQICVVESPA
DIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLDLLEKRLSTEAISEVILATNPTVEGDATANYIGQMCGQYGILASR
IAHGVPVGGELEMVDGTTLSHSLAGRNPIKY

Sequences:

>Translated_191_residues
MEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEHCTICLNPRRQQNGQICVVESPA
DIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLDLLEKRLSTEAISEVILATNPTVEGDATANYIGQMCGQYGILASR
IAHGVPVGGELEMVDGTTLSHSLAGRNPIKY
>Mature_191_residues
MEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEHCTICLNPRRQQNGQICVVESPA
DIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLDLLEKRLSTEAISEVILATNPTVEGDATANYIGQMCGQYGILASR
IAHGVPVGGELEMVDGTTLSHSLAGRNPIKY

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=191, Percent_Identity=85.8638743455497, Blast_Score=344, Evalue=2e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 20554; Mature: 20554

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEHCT
CCCCHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEE
ICLNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLDLLEK
EEECCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHH
RLSTEAISEVILATNPTVEGDATANYIGQMCGQYGILASRIAHGVPVGGELEMVDGTTLS
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHH
HSLAGRNPIKY
HHHCCCCCCCC
>Mature Secondary Structure
MEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEHCT
CCCCHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEE
ICLNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLDLLEK
EEECCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHH
RLSTEAISEVILATNPTVEGDATANYIGQMCGQYGILASRIAHGVPVGGELEMVDGTTLS
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHH
HSLAGRNPIKY
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA