| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170025387
Identifier: 170025387
GI number: 170025387
Start: 3464737
End: 3464994
Strand: Direct
Name: 170025387
Synonym: YPK_3168
Alternate gene names: NA
Gene position: 3464737-3464994 (Clockwise)
Preceding gene: 170025386
Following gene: 170025388
Centisome position: 73.88
GC content: 48.06
Gene sequence:
>258_bases ATGAGTTTAAAACTCATCAGACTGCTGACAAACCCCGATGACGCGATCTTGAACGGTGAGGATAGGCAGAGGAGTAAAGC GTCCGCGCCAAGGATGGCGCGGCTCGAGCCTACATGGATGTATTTACGGCGTCTTTACGATCTGCCTGTTCTCTCCGTCG CGGGCACTTTGTCAATAACCTCAATGAGTTTAAAACTCATGAGATACATCAACGATAACCGCATGATTGCCATGCATACA CAGCGTTCTCAATTTTAG
Upstream 100 bases:
>100_bases AGGGTGTTTTTGCGGATATTGCCAAGCGGGATTGAGTCATCACTCCATCATATTCACGCTACGTTATATCCTGCGATCCA CCGAGACTATGAAGGAAAGA
Downstream 100 bases:
>100_bases TCGGGTGATTAATATGGGTTATGATGCACACAAGAATGATCTTAATATAAAAGCAGATCTTATTGCCTTGAAGTATGTTG TTCAGACATTGGTCGCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MSLKLIRLLTNPDDAILNGEDRQRSKASAPRMARLEPTWMYLRRLYDLPVLSVAGTLSITSMSLKLMRYINDNRMIAMHT QRSQF
Sequences:
>Translated_85_residues MSLKLIRLLTNPDDAILNGEDRQRSKASAPRMARLEPTWMYLRRLYDLPVLSVAGTLSITSMSLKLMRYINDNRMIAMHT QRSQF >Mature_84_residues SLKLIRLLTNPDDAILNGEDRQRSKASAPRMARLEPTWMYLRRLYDLPVLSVAGTLSITSMSLKLMRYINDNRMIAMHTQ RSQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9884; Mature: 9753
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.2 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKLIRLLTNPDDAILNGEDRQRSKASAPRMARLEPTWMYLRRLYDLPVLSVAGTLSIT CCCEEEEEECCCCCCEECCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHCCCEEHH SMSLKLMRYINDNRMIAMHTQRSQF HHHHHHHHHHCCCCEEEEECCCCCC >Mature Secondary Structure SLKLIRLLTNPDDAILNGEDRQRSKASAPRMARLEPTWMYLRRLYDLPVLSVAGTLSIT CCEEEEEECCCCCCEECCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHCCCEEHH SMSLKLMRYINDNRMIAMHTQRSQF HHHHHHHHHHCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA