| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170025358
Identifier: 170025358
GI number: 170025358
Start: 3431788
End: 3432375
Strand: Direct
Name: 170025358
Synonym: YPK_3139
Alternate gene names: NA
Gene position: 3431788-3432375 (Clockwise)
Preceding gene: 170025347
Following gene: 170025359
Centisome position: 73.18
GC content: 48.64
Gene sequence:
>588_bases ATGGCTTACCGAACCAATCTGAATTACACCATCGATAATGAGTTGTTCACCAACCTGATAGATCACATGGAACGGATGCG TGAACGTCACTCTGACATCATTCCACTGCGTATGGACTTTGCTTATAAGACGAGCAGTAAACGTTATGCTGATCGCTACC GTGATCACTGGGATATGGACATGTACCGGCTGGCAGAACGGGTACTCAATACCAACACGGTTATCGGTTATGCCTGGGTG ATGGAATTTACCTACAGGCATGGGCTACACTTTCACGCCATGTTTTATCTGGATGGACAGCGTAAGCGGAATTGTTACCG CTCTGCGAGGGTTATCGCCGAAGAGTGGCGGGATATCACTGAGGGGATGGGGATATTTGAAAACTGCCAGAAGAAGATTT ATCACAAAGTTAATGGGGCTCGAAATCTCCACTACTCAGACCGCAAAGGCTATCGGGATCTGGCGTTTATTCTGAGCTAT CTGGCTAAGCAGGAGCAGAAGGAAGCGTATGCGGCACCGGTATGTTGGCTGAATGATATACGGCGACGAGGACAGGGAGG AAGGCCACGTAACGGAAGAGGAAAATGA
Upstream 100 bases:
>100_bases ATGTCCTGTACTGGCAATATGTACCTCAGCCAAATGCATCTGAACGATTCAAATTTGAAGTCAATCTCTCATCCAGTGTT AACTACTTGAGAGAACTGAC
Downstream 100 bases:
>100_bases ACATCGTTAAAAAATTACGCCAGTACGTCTTCGTTTGAAGAAGTCTGCACCATCACACCTCTGACTTCTTCTCCCTTACC ATTAACGGAGAGAAACGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MAYRTNLNYTIDNELFTNLIDHMERMRERHSDIIPLRMDFAYKTSSKRYADRYRDHWDMDMYRLAERVLNTNTVIGYAWV MEFTYRHGLHFHAMFYLDGQRKRNCYRSARVIAEEWRDITEGMGIFENCQKKIYHKVNGARNLHYSDRKGYRDLAFILSY LAKQEQKEAYAAPVCWLNDIRRRGQGGRPRNGRGK
Sequences:
>Translated_195_residues MAYRTNLNYTIDNELFTNLIDHMERMRERHSDIIPLRMDFAYKTSSKRYADRYRDHWDMDMYRLAERVLNTNTVIGYAWV MEFTYRHGLHFHAMFYLDGQRKRNCYRSARVIAEEWRDITEGMGIFENCQKKIYHKVNGARNLHYSDRKGYRDLAFILSY LAKQEQKEAYAAPVCWLNDIRRRGQGGRPRNGRGK >Mature_194_residues AYRTNLNYTIDNELFTNLIDHMERMRERHSDIIPLRMDFAYKTSSKRYADRYRDHWDMDMYRLAERVLNTNTVIGYAWVM EFTYRHGLHFHAMFYLDGQRKRNCYRSARVIAEEWRDITEGMGIFENCQKKIYHKVNGARNLHYSDRKGYRDLAFILSYL AKQEQKEAYAAPVCWLNDIRRRGQGGRPRNGRGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23554; Mature: 23423
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYRTNLNYTIDNELFTNLIDHMERMRERHSDIIPLRMDFAYKTSSKRYADRYRDHWDMD CCEECCCCEEECHHHHHHHHHHHHHHHHHHCCCCEEEECCHHCCCCHHHHHHHHCCCCHH MYRLAERVLNTNTVIGYAWVMEFTYRHGLHFHAMFYLDGQRKRNCYRSARVIAEEWRDIT HHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHH EGMGIFENCQKKIYHKVNGARNLHYSDRKGYRDLAFILSYLAKQEQKEAYAAPVCWLNDI HHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH RRRGQGGRPRNGRGK HHCCCCCCCCCCCCC >Mature Secondary Structure AYRTNLNYTIDNELFTNLIDHMERMRERHSDIIPLRMDFAYKTSSKRYADRYRDHWDMD CEECCCCEEECHHHHHHHHHHHHHHHHHHCCCCEEEECCHHCCCCHHHHHHHHCCCCHH MYRLAERVLNTNTVIGYAWVMEFTYRHGLHFHAMFYLDGQRKRNCYRSARVIAEEWRDIT HHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHH EGMGIFENCQKKIYHKVNGARNLHYSDRKGYRDLAFILSYLAKQEQKEAYAAPVCWLNDI HHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH RRRGQGGRPRNGRGK HHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA