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The map label for this gene is yfdK [H]

Identifier: 170025329

GI number: 170025329

Start: 3407738

End: 3408175

Strand: Reverse

Name: yfdK [H]

Synonym: YPK_3110

Alternate gene names: 170025329

Gene position: 3408175-3407738 (Counterclockwise)

Preceding gene: 170025330

Following gene: 170025325

Centisome position: 72.68

GC content: 44.98

Gene sequence:

>438_bases
ATGATGATTTATTTTAGCGCAACAATAGGTGGATTTATCCCGGGTGAATGGAGAGTTGACGGAACATACACTGATGAAAC
TTGGCCCACTGATGCCGTATTGCTCACTGATATTGAATCGGTAGAATTTTGGAAGCGGACCGCACCATCTGGAAAGATGT
TAGGGTCTGTAAAATACCGCCCCGTGTGGGTTGATTTACCCACACCCACGGCTGTAGAAGTTGCATCACAGAAAGCAGGG
TTTGTTGCTCAAGCGAAACTCAAAAAATCAAAGCTAATAAGTGATGCAAGAGATAGAATAGAGATTCTAAAAGATAGGAT
TGAGGCGGGGCAAGATAAAGCCGCAGAGCTGAAACTGTGGAAGTCATATCGTATAGCGCTTGATGATATTGATGTGAGTG
CAGCGCCTGATATCGAGTGGCCAGTAGCGCCTCAGTAA

Upstream 100 bases:

>100_bases
CAGAAATTCTATCACTCTGTTTTCTCAAGTCTTTGGTTCCGGTTCGGTCCCCGGTACTGCGATCCCTCTCATTTTAGTTA
TAGGGTATTAAGAGGTTTAT

Downstream 100 bases:

>100_bases
CAATCAAAGCCGGGCTTAATGGCCCGGTCTATTCATGTGTAGCGAGTGGTTTTCGCGTCAACCGGTTTTACATTATGGCG
CTGTTCTGTCAACTGAGGGG

Product: tail assembly chaperone gp38

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MMIYFSATIGGFIPGEWRVDGTYTDETWPTDAVLLTDIESVEFWKRTAPSGKMLGSVKYRPVWVDLPTPTAVEVASQKAG
FVAQAKLKKSKLISDARDRIEILKDRIEAGQDKAAELKLWKSYRIALDDIDVSAAPDIEWPVAPQ

Sequences:

>Translated_145_residues
MMIYFSATIGGFIPGEWRVDGTYTDETWPTDAVLLTDIESVEFWKRTAPSGKMLGSVKYRPVWVDLPTPTAVEVASQKAG
FVAQAKLKKSKLISDARDRIEILKDRIEAGQDKAAELKLWKSYRIALDDIDVSAAPDIEWPVAPQ
>Mature_145_residues
MMIYFSATIGGFIPGEWRVDGTYTDETWPTDAVLLTDIESVEFWKRTAPSGKMLGSVKYRPVWVDLPTPTAVEVASQKAG
FVAQAKLKKSKLISDARDRIEILKDRIEAGQDKAAELKLWKSYRIALDDIDVSAAPDIEWPVAPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ymfS [H]

Homologues:

Organism=Escherichia coli, GI1788696, Length=150, Percent_Identity=35.3333333333333, Blast_Score=70, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003458 [H]

Pfam domain/function: PF02413 Caudo_TAP [H]

EC number: NA

Molecular weight: Translated: 16201; Mature: 16201

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIYFSATIGGFIPGEWRVDGTYTDETWPTDAVLLTDIESVEFWKRTAPSGKMLGSVKYR
CEEEEEECCCCCCCCCEEECCEECCCCCCCCEEEEECCHHHHHHHHCCCCCCEEECEEEC
PVWVDLPTPTAVEVASQKAGFVAQAKLKKSKLISDARDRIEILKDRIEAGQDKAAELKLW
EEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEE
KSYRIALDDIDVSAAPDIEWPVAPQ
HEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMIYFSATIGGFIPGEWRVDGTYTDETWPTDAVLLTDIESVEFWKRTAPSGKMLGSVKYR
CEEEEEECCCCCCCCCEEECCEECCCCCCCCEEEEECCHHHHHHHHCCCCCCEEECEEEC
PVWVDLPTPTAVEVASQKAGFVAQAKLKKSKLISDARDRIEILKDRIEAGQDKAAELKLW
EEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEE
KSYRIALDDIDVSAAPDIEWPVAPQ
HEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]