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The map label for this gene is yfeT [C]

Identifier: 170025272

GI number: 170025272

Start: 3353162

End: 3354016

Strand: Direct

Name: yfeT [C]

Synonym: YPK_3051

Alternate gene names: 170025272

Gene position: 3353162-3354016 (Clockwise)

Preceding gene: 170025257

Following gene: 170025274

Centisome position: 71.5

GC content: 55.67

Gene sequence:

>855_bases
ATGACTACAGCAAGCAATCTGAGTGAACTACAGCAGCAGATCCGTGATCGTTACGACAACCTGAGTAAGCGGCTCCAGCA
GGTTTCCCGCTATGTGTTGGACAATACCAACAGCGTGGCGTTTGACACCGTCGCCGTCATTGCCGAACGCGCAGACGTGC
CTCCGTCAACCTTAATCCGTTTTGCTAACGCCTTTGATTTCAGCGGCTTCAACGAGATGAAACAACTGTTTCGTATGAAT
CTGGTGGAAGAGACCGCGAGTTATACCGATCGTGCACGGCTGTTTCGCGCAATGGAAAGCGAAGCCGTGCCGGAAACGCC
ACTCGGTATCCTGCAAGAGTTTGCCCGATCCAATGCTCAGGCACTACAGCAGTTGGCGGCACGTACTGAACCAGAGATGC
TGCAACGCGCGGTGGAACTGCTTGCTCAGGCCGATACCATTTATGTGGTGGGCCTGCGCCGCTCGTTCAGCGTGGCCGCC
TATCTGACCTACGCACTCAGCCATTTGGAATGTCGCCCAGTACAACTTCATGGCCTCGGGGGGATGTTGCGCGAGCAGGT
GAACAGCATTAAAGCACGCGATATCGTGGTTTCTATCAGTTTCTCTCCTTACGCCGAAGAGACCGTGATGGTCAGTGAAA
TAGCCGCTAGCGCGGGTGCCCGGCAGATTGTCATTACCGACAGCCAGATAAGCCCGCTCGCCACGTTCAGCGATCTCTGT
TTTGTGGTGAAAGAGGCTCAGGTAGATGCCTTCCGATCTCAATCAGCCACGCTCTGTCTAGTGCAGTCGCTGGTCGTGGC
GTTGGCCTACCAGCAGGAGGATCAGGCTGGGGCCGCGCTGGCGCACAGACAGTAA

Upstream 100 bases:

>100_bases
CCCGGAGCGTCTGTTTCATTTTGTGGGTGGTCTGAGTAGCAGGCGTTTAAAAACAGCCGTCGAGCGATTACAATCATAAT
CATGTATTAAGGGAGAAATA

Downstream 100 bases:

>100_bases
CCCTCTATAAGCTGCCTGTACGGCAGTGAACGCATTGCCGTTGAAGAGATCCGTCGTTGGCTTTTTCTAAGCTGCCTGTG
CGGCAGTGAACAGTAAGATA

Product: RpiR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MTTASNLSELQQQIRDRYDNLSKRLQQVSRYVLDNTNSVAFDTVAVIAERADVPPSTLIRFANAFDFSGFNEMKQLFRMN
LVEETASYTDRARLFRAMESEAVPETPLGILQEFARSNAQALQQLAARTEPEMLQRAVELLAQADTIYVVGLRRSFSVAA
YLTYALSHLECRPVQLHGLGGMLREQVNSIKARDIVVSISFSPYAEETVMVSEIAASAGARQIVITDSQISPLATFSDLC
FVVKEAQVDAFRSQSATLCLVQSLVVALAYQQEDQAGAALAHRQ

Sequences:

>Translated_284_residues
MTTASNLSELQQQIRDRYDNLSKRLQQVSRYVLDNTNSVAFDTVAVIAERADVPPSTLIRFANAFDFSGFNEMKQLFRMN
LVEETASYTDRARLFRAMESEAVPETPLGILQEFARSNAQALQQLAARTEPEMLQRAVELLAQADTIYVVGLRRSFSVAA
YLTYALSHLECRPVQLHGLGGMLREQVNSIKARDIVVSISFSPYAEETVMVSEIAASAGARQIVITDSQISPLATFSDLC
FVVKEAQVDAFRSQSATLCLVQSLVVALAYQQEDQAGAALAHRQ
>Mature_283_residues
TTASNLSELQQQIRDRYDNLSKRLQQVSRYVLDNTNSVAFDTVAVIAERADVPPSTLIRFANAFDFSGFNEMKQLFRMNL
VEETASYTDRARLFRAMESEAVPETPLGILQEFARSNAQALQQLAARTEPEMLQRAVELLAQADTIYVVGLRRSFSVAAY
LTYALSHLECRPVQLHGLGGMLREQVNSIKARDIVVSISFSPYAEETVMVSEIAASAGARQIVITDSQISPLATFSDLCF
VVKEAQVDAFRSQSATLCLVQSLVVALAYQQEDQAGAALAHRQ

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 31451; Mature: 31320

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTASNLSELQQQIRDRYDNLSKRLQQVSRYVLDNTNSVAFDTVAVIAERADVPPSTLIR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHH
FANAFDFSGFNEMKQLFRMNLVEETASYTDRARLFRAMESEAVPETPLGILQEFARSNAQ
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHH
ALQQLAARTEPEMLQRAVELLAQADTIYVVGLRRSFSVAAYLTYALSHLECRPVQLHGLG
HHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCH
GMLREQVNSIKARDIVVSISFSPYAEETVMVSEIAASAGARQIVITDSQISPLATFSDLC
HHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
FVVKEAQVDAFRSQSATLCLVQSLVVALAYQQEDQAGAALAHRQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHCCHHCCCC
>Mature Secondary Structure 
TTASNLSELQQQIRDRYDNLSKRLQQVSRYVLDNTNSVAFDTVAVIAERADVPPSTLIR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHH
FANAFDFSGFNEMKQLFRMNLVEETASYTDRARLFRAMESEAVPETPLGILQEFARSNAQ
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHH
ALQQLAARTEPEMLQRAVELLAQADTIYVVGLRRSFSVAAYLTYALSHLECRPVQLHGLG
HHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCH
GMLREQVNSIKARDIVVSISFSPYAEETVMVSEIAASAGARQIVITDSQISPLATFSDLC
HHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
FVVKEAQVDAFRSQSATLCLVQSLVVALAYQQEDQAGAALAHRQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]