| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170025164
Identifier: 170025164
GI number: 170025164
Start: 3239891
End: 3240709
Strand: Direct
Name: 170025164
Synonym: YPK_2942
Alternate gene names: NA
Gene position: 3239891-3240709 (Clockwise)
Preceding gene: 170025163
Following gene: 170025165
Centisome position: 69.09
GC content: 50.67
Gene sequence:
>819_bases ATGTGGGGTGTTCTTGCTACTTCGTTACTGTTTTTACCACTGAGCCAGGTGCTCTCCCTGTTATTTTTGGTTTCATCATT AGCAATGGCCTGTTATAGCGGTGTCCTCACCTTCCCTGCTACCGCGTTTTTACTTGCCATAATCATCCTCGTGCTACTGC TGCAAAAGTATCGTCAACGTAATGGCGTCGCCGCTGGGTTGGAGTTGCTGCTCGTACTGGGCGTTATCGCGTTATTCCTG CACCTTGTTCCTGGTTTTCACAACCTGAAAGTGCTGGATAAAGTCCGTACCGGGCCGCTCAGTGCCCCCTTCACCATGTA TTACAATCTGGATAAGGCGCTAGTCCCCTTTATCTTACTGGCCTGTCTGCCAACCCTGTTCAAGGTGAAAAAACACCCAT CAGTCGGGCGCATGGGTTGGGTTGTGCTGATACTCAGCGTACCCGCCTTATTGTTGCTGGCTGTGGCGCTCGGTGGCTTG AAAATTGAGCTGCATACCCCGGTTTGGATAGGCTCCTTTATTATTGCCAATCTGTTTTTTGTTTGTCTGGCTGAAGAAGC CTTATTCCGTGGCTACTTGCAACAACGCCTCGGTCAGTGGCTTGGGTCTTACCCAGCGTTGGTCATCACCGCATTACTCT TTGGCAGTGCCCACTTCGCCGGTGGCCCGCTATTAATGTTATTCGCCGCACTGGCAGGTGTTATTTATGGCTTGGCCTGG CTATGGAGTGGCCGCCTGTGGGTTGCCGTGGCTTTCCATTTCGCCCTGAATTTAATGCATTTACTGTTCTTCACCTATCC ACTCTATTTACCCCACTAA
Upstream 100 bases:
>100_bases CAAGTGTAAATTGGTTGATTTAGCTCAAAAAAATGCCTTAGGCTAAACCGTCATTTAGGGCTATGCCATCAATCAGGATG AAATAAGAAAGGGATTATCT
Downstream 100 bases:
>100_bases ATGAACCAAAGGGATCACTACCGCGATTAAGTCATCGCCCATTGGTGACTGACATCAAGATAAATTGACCTATCAACCTA TGGCAGTAACCTCGTGAGCA
Product: abortive infection protein
Products: NA
Alternate protein names: CAAX Amino Terminal Protease Family Protein; CAAX Amino Terminal Protease Family; CAAX Amino Protease; CAAX Protease Family Protein; Membrane-Associated CAAX Amino Terminal Protease; Membrane Associated Protease; Caax Amino Terminal Protease Family; Membrane-Associated Protease
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MWGVLATSLLFLPLSQVLSLLFLVSSLAMACYSGVLTFPATAFLLAIIILVLLLQKYRQRNGVAAGLELLLVLGVIALFL HLVPGFHNLKVLDKVRTGPLSAPFTMYYNLDKALVPFILLACLPTLFKVKKHPSVGRMGWVVLILSVPALLLLAVALGGL KIELHTPVWIGSFIIANLFFVCLAEEALFRGYLQQRLGQWLGSYPALVITALLFGSAHFAGGPLLMLFAALAGVIYGLAW LWSGRLWVAVAFHFALNLMHLLFFTYPLYLPH
Sequences:
>Translated_272_residues MWGVLATSLLFLPLSQVLSLLFLVSSLAMACYSGVLTFPATAFLLAIIILVLLLQKYRQRNGVAAGLELLLVLGVIALFL HLVPGFHNLKVLDKVRTGPLSAPFTMYYNLDKALVPFILLACLPTLFKVKKHPSVGRMGWVVLILSVPALLLLAVALGGL KIELHTPVWIGSFIIANLFFVCLAEEALFRGYLQQRLGQWLGSYPALVITALLFGSAHFAGGPLLMLFAALAGVIYGLAW LWSGRLWVAVAFHFALNLMHLLFFTYPLYLPH >Mature_272_residues MWGVLATSLLFLPLSQVLSLLFLVSSLAMACYSGVLTFPATAFLLAIIILVLLLQKYRQRNGVAAGLELLLVLGVIALFL HLVPGFHNLKVLDKVRTGPLSAPFTMYYNLDKALVPFILLACLPTLFKVKKHPSVGRMGWVVLILSVPALLLLAVALGGL KIELHTPVWIGSFIIANLFFVCLAEEALFRGYLQQRLGQWLGSYPALVITALLFGSAHFAGGPLLMLFAALAGVIYGLAW LWSGRLWVAVAFHFALNLMHLLFFTYPLYLPH
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29886; Mature: 29886
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWGVLATSLLFLPLSQVLSLLFLVSSLAMACYSGVLTFPATAFLLAIIILVLLLQKYRQR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NGVAAGLELLLVLGVIALFLHLVPGFHNLKVLDKVRTGPLSAPFTMYYNLDKALVPFILL CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHEECCHHHHHHHHHH ACLPTLFKVKKHPSVGRMGWVVLILSVPALLLLAVALGGLKIELHTPVWIGSFIIANLFF HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHH VCLAEEALFRGYLQQRLGQWLGSYPALVITALLFGSAHFAGGPLLMLFAALAGVIYGLAW HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LWSGRLWVAVAFHFALNLMHLLFFTYPLYLPH HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MWGVLATSLLFLPLSQVLSLLFLVSSLAMACYSGVLTFPATAFLLAIIILVLLLQKYRQR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NGVAAGLELLLVLGVIALFLHLVPGFHNLKVLDKVRTGPLSAPFTMYYNLDKALVPFILL CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHEECCHHHHHHHHHH ACLPTLFKVKKHPSVGRMGWVVLILSVPALLLLAVALGGLKIELHTPVWIGSFIIANLFF HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHH VCLAEEALFRGYLQQRLGQWLGSYPALVITALLFGSAHFAGGPLLMLFAALAGVIYGLAW HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LWSGRLWVAVAFHFALNLMHLLFFTYPLYLPH HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA