| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is yyaM [H]
Identifier: 170025134
GI number: 170025134
Start: 3208618
End: 3209499
Strand: Direct
Name: yyaM [H]
Synonym: YPK_2912
Alternate gene names: 170025134
Gene position: 3208618-3209499 (Clockwise)
Preceding gene: 170025131
Following gene: 170025137
Centisome position: 68.42
GC content: 45.35
Gene sequence:
>882_bases ATGACAACAAGAGTACTTAAAGCGCATTTGCAAATGTTGGGGTTTACCGCTCTACTTGGCGGTTCCTTTATTGCCAGCGC CACCATCAGCAACGCACTGCCACCAATGGTAATTACTTGGCTGAGATACGCTATTGCAAGCCTGTTTTTTGTTGTATTGC TGGTGAGTCAGGGTTTACTAACGTTACCTCATTACCGAGATTTGGGCCGTTATACTCTGATTAGCCTACCGCCGCTGCTC TATTTTGCCTGTATGATCTTTTCACTGCAGACAACCAGCGCGATAAATTCGAGTGCGTTATACACCACTGTGCCATTAAT GAGCATGGTAATAAGTGTGGTGTTTTTGAACGCAAAATCGACGTGGCCTGTGGTAGCCGCATTATTGCTTGGAATTTTAG GGGCATTATTAATCATTTTTAAAGGTGACTTGTCTCAGGTTTTACACTTGTCGCTGATGCCATCTGATTACCTGTTCCTG TTTGGTTGTTTAGGCATGGCGCTGAATCCTATTGTGGTGAAGAAGTTACATCGGGGTGAGCACGCCTTGGTGCTTACCGG TTGGAGCTTGATATGCGCCACACTACTGCTAACGGTGATCATCGCCTATCAGCTTCCAGAAATTGAATGGCGCAATATTA GCGTCATCACCTGGAGCGGCGTTTTATATCTTGCCACCTTTGCCACCGCATTAAGTTTCTTTCTGTTCCAAAAAGCCTGC ATTGTGCTTTCGCCGACGAAAGTATCAGGCTATGTGTACCTGATCCCGCTGTCAGTCATTGTCACTAATATGATGTTAGG CCAGGCAATAAATTGGCAAGAGATCGCCAGCGGAGCCATTTTAGTGATTATCGCGATGGCTATTTTAGTTAAAGCCAAGT AA
Upstream 100 bases:
>100_bases ACCAATACTAAAAACCCGCTAATCCATACTGAAAATGTAATGGTTCAGAATGTGTTTCCACGCAATTATCATCGATCACA AGAGGGTAACGGGTAAGCAC
Downstream 100 bases:
>100_bases TACCGGCCAGTGAATGCCACAGATTCAAAAATCACACTCAAAATAACGCAAGCAACTTATTTAGTGCCGGAGTCACGCTA TCAGGGTGATAAACAGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTTRVLKAHLQMLGFTALLGGSFIASATISNALPPMVITWLRYAIASLFFVVLLVSQGLLTLPHYRDLGRYTLISLPPLL YFACMIFSLQTTSAINSSALYTTVPLMSMVISVVFLNAKSTWPVVAALLLGILGALLIIFKGDLSQVLHLSLMPSDYLFL FGCLGMALNPIVVKKLHRGEHALVLTGWSLICATLLLTVIIAYQLPEIEWRNISVITWSGVLYLATFATALSFFLFQKAC IVLSPTKVSGYVYLIPLSVIVTNMMLGQAINWQEIASGAILVIIAMAILVKAK
Sequences:
>Translated_293_residues MTTRVLKAHLQMLGFTALLGGSFIASATISNALPPMVITWLRYAIASLFFVVLLVSQGLLTLPHYRDLGRYTLISLPPLL YFACMIFSLQTTSAINSSALYTTVPLMSMVISVVFLNAKSTWPVVAALLLGILGALLIIFKGDLSQVLHLSLMPSDYLFL FGCLGMALNPIVVKKLHRGEHALVLTGWSLICATLLLTVIIAYQLPEIEWRNISVITWSGVLYLATFATALSFFLFQKAC IVLSPTKVSGYVYLIPLSVIVTNMMLGQAINWQEIASGAILVIIAMAILVKAK >Mature_292_residues TTRVLKAHLQMLGFTALLGGSFIASATISNALPPMVITWLRYAIASLFFVVLLVSQGLLTLPHYRDLGRYTLISLPPLLY FACMIFSLQTTSAINSSALYTTVPLMSMVISVVFLNAKSTWPVVAALLLGILGALLIIFKGDLSQVLHLSLMPSDYLFLF GCLGMALNPIVVKKLHRGEHALVLTGWSLICATLLLTVIIAYQLPEIEWRNISVITWSGVLYLATFATALSFFLFQKACI VLSPTKVSGYVYLIPLSVIVTNMMLGQAINWQEIASGAILVIIAMAILVKAK
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31970; Mature: 31839
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRVLKAHLQMLGFTALLGGSFIASATISNALPPMVITWLRYAIASLFFVVLLVSQGLL CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC TLPHYRDLGRYTLISLPPLLYFACMIFSLQTTSAINSSALYTTVPLMSMVISVVFLNAKS CCCCHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC TWPVVAALLLGILGALLIIFKGDLSQVLHLSLMPSDYLFLFGCLGMALNPIVVKKLHRGE CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC HALVLTGWSLICATLLLTVIIAYQLPEIEWRNISVITWSGVLYLATFATALSFFLFQKAC EEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH IVLSPTKVSGYVYLIPLSVIVTNMMLGQAINWQEIASGAILVIIAMAILVKAK HEECCCCCCCEEEEEEHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHCCC >Mature Secondary Structure TTRVLKAHLQMLGFTALLGGSFIASATISNALPPMVITWLRYAIASLFFVVLLVSQGLL CHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC TLPHYRDLGRYTLISLPPLLYFACMIFSLQTTSAINSSALYTTVPLMSMVISVVFLNAKS CCCCHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC TWPVVAALLLGILGALLIIFKGDLSQVLHLSLMPSDYLFLFGCLGMALNPIVVKKLHRGE CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC HALVLTGWSLICATLLLTVIIAYQLPEIEWRNISVITWSGVLYLATFATALSFFLFQKAC EEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH IVLSPTKVSGYVYLIPLSVIVTNMMLGQAINWQEIASGAILVIIAMAILVKAK HEECCCCCCCEEEEEEHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]