| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is zraP [H]
Identifier: 170025131
GI number: 170025131
Start: 3205486
End: 3205959
Strand: Direct
Name: zraP [H]
Synonym: YPK_2909
Alternate gene names: 170025131
Gene position: 3205486-3205959 (Clockwise)
Preceding gene: 170025127
Following gene: 170025134
Centisome position: 68.36
GC content: 45.99
Gene sequence:
>474_bases ATGAACCTGAACAAAACAGCGATTGTAACCCTTCTTTCTCTTGCTACCCTGATTGGATTCGGTGGCTCTGCTATTGCTCA AAATGCTATGGGCACCCATATGAATGGCGACGGCACGGATATGTCTCATTCTCAGGGAAAGCACTCTGGAAAGAATTCCA TGGCGAATTTGACGACAGAACAACAGGCGATACGCCAGCAAGTACTTAATGAATTTCAGGCATCAACAGCAGATATGCGC CAACAACTGACCTCCAAAAACTATGAGTACAAAGCGCTATTAACCAGCAAACCAGTAGATGAACAAAAGGTTCTGGCTGT CAGTAAAGAGATTCAAACGTTAAGAGATAGCCTCTACCAACGTCGCGTCTCAATGGATACCCAGTTAGCAAAAGCGGGGA TAGCAATGACGGGAAACCATAGTTCAAGAGGGGGTAATCATATGGGAATGGCCGGTGGGAGAGGTTGCCGATAA
Upstream 100 bases:
>100_bases GCCATTAGCATATTGGCATAGGAATTGCCTTAACGTAATAAGCTTACTACGTGACGTTTCACTGATTCACTGACTCATAC CGAAATAAAGGATACTCACT
Downstream 100 bases:
>100_bases AATAGAAACTCCCCTGATTAACATTTGATTAATCAGGGGTTATCTGGAGAGTCTATTTTGGACGAGTAGACTTCCTCCCG ATAATGATTAATGGGATAAC
Product: zinc resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MNLNKTAIVTLLSLATLIGFGGSAIAQNAMGTHMNGDGTDMSHSQGKHSGKNSMANLTTEQQAIRQQVLNEFQASTADMR QQLTSKNYEYKALLTSKPVDEQKVLAVSKEIQTLRDSLYQRRVSMDTQLAKAGIAMTGNHSSRGGNHMGMAGGRGCR
Sequences:
>Translated_157_residues MNLNKTAIVTLLSLATLIGFGGSAIAQNAMGTHMNGDGTDMSHSQGKHSGKNSMANLTTEQQAIRQQVLNEFQASTADMR QQLTSKNYEYKALLTSKPVDEQKVLAVSKEIQTLRDSLYQRRVSMDTQLAKAGIAMTGNHSSRGGNHMGMAGGRGCR >Mature_157_residues MNLNKTAIVTLLSLATLIGFGGSAIAQNAMGTHMNGDGTDMSHSQGKHSGKNSMANLTTEQQAIRQQVLNEFQASTADMR QQLTSKNYEYKALLTSKPVDEQKVLAVSKEIQTLRDSLYQRRVSMDTQLAKAGIAMTGNHSSRGGNHMGMAGGRGCR
Specific function: Binds zinc. Could be an important component of the zinc- balancing mechanism [H]
COG id: COG3678
COG function: function code UNTP; P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ZraP family [H]
Homologues:
Organism=Escherichia coli, GI87082358, Length=80, Percent_Identity=47.5, Blast_Score=79, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16916; Mature: 16916
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNKTAIVTLLSLATLIGFGGSAIAQNAMGTHMNGDGTDMSHSQGKHSGKNSMANLTTE CCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH QQAIRQQVLNEFQASTADMRQQLTSKNYEYKALLTSKPVDEQKVLAVSKEIQTLRDSLYQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH RRVSMDTQLAKAGIAMTGNHSSRGGNHMGMAGGRGCR HHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNLNKTAIVTLLSLATLIGFGGSAIAQNAMGTHMNGDGTDMSHSQGKHSGKNSMANLTTE CCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH QQAIRQQVLNEFQASTADMRQQLTSKNYEYKALLTSKPVDEQKVLAVSKEIQTLRDSLYQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH RRVSMDTQLAKAGIAMTGNHSSRGGNHMGMAGGRGCR HHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA