| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is bglA [H]
Identifier: 170025029
GI number: 170025029
Start: 3093956
End: 3095392
Strand: Reverse
Name: bglA [H]
Synonym: YPK_2805
Alternate gene names: 170025029
Gene position: 3095392-3093956 (Counterclockwise)
Preceding gene: 170025030
Following gene: 170025021
Centisome position: 66.01
GC content: 46.28
Gene sequence:
>1437_bases ATGAGCTATCAACAGTTACCGAAAGATTTTTTATGGGGTGGCGCGGTTGCGGCACATCAGGTTGAAGGCGGCTGGGATAA AGGCGGCAAAGGCGTGAGCATTGCTGATGTCCTCTCTGGTGGCTCCCATGGGGTTGACCGTGTGATGACAGACGGAGTAC TGGAAGGGTATCGTTATCCAAACCATGAAGCAGTTGATTTTTATAGCCATTACAAAGAAGACATCGCGCTGTTTGCCGAA ATGGGCTTCAAATGTTTCCGCACCTCAATTGCCTGGACTCGTATCTTCCCGCATGGCGATGAACAGCAACCCAATGAAGC CGGCCTGCAATTTTATGACGATATGTTCGATGAATTGCTGAAATACGGTATTGAACCGGTGATTACGTTATCTCACTTCG AAATGCCGTGGCATCTGGTCAAAGAATATGGTGGCTGGAAAAACCGTAAAGTGGTCGATTTCTTTGTAAAATTCAGTGAA GTCGTCATGGCGCGCTACAAAAGCAAAGTTAAATATTGGATGACCTTCAACGAGATAAATAACCAGCGTAACTGGAAATA TCCACTGTTTGGTTATTGCTGTTCTGGTGTGGTGTTCACTGAACAAGAGAACCCAGAAGAGACCCTGTATCAGGTACTGC ATCATCAGTTTGTTGCCAGTGCCAAAGTGGTCAAGCTGGGTCATGCCATTAATCCGGAATTTAAGATTGGCTGTATGGTG GCGATGGTGCCTCTGTATCCTTTCTCCTGCCATCCAGATGACATGATGTATTCCGTTGAAGCTATGCGTGAGCGTTATCT TTTCGGCGACGTTCATATGCGCGGTTATTACCCTTCATATATTTTACAAGAGTGGGCGCGCCGTGGTTTCAATATCCATA TGGAAGAGGGGGACCTCGAGACTCTGCGTGATGGTTGCGCCGATTACATGGGGCTGAGTTATTACATGAGTAACGCGGTC TCTGCGATTAATCCAGGTAGCGGCAATTCACTCTCTGGTTTTGAGGGCAGCGTGCCGAACCCACACGTCAAAGCCTCTGA TTGGGGGTGGCAGATTGATCCGGTAGGTCTGCGTTACTCTCTGAGTGTGTTGTATGAACGCTATCAGAAGCCGCTATTTA TTGTTGAAAATGGTTTTGGTGCGATAGATAAAGTGGCAGCGGATGGCATGGTGCACGACGACTACCGCATTGCTTATCTA AAAGCCCATATCGAGCAGATGAAAAAAGCGGTATTTGAAGATGGCGTGGATCTAATGGGTTATACCCCATGGGGATGTAT TGACTGCGTATCTTTCACTACCGGTGAATACAGCAAACGTTATGGCTTTATTTATGTCGATAAAAACGATGATGGCACCG GTACAATGGCGCGTTCACGTAAGTTAAGTTTTGATTGGTATAAAAAAGTTATTGCCAGCAATGGTGAAGTTCTTTAA
Upstream 100 bases:
>100_bases CCGCCCAGCACGTCATCAGCTTGTTCAATGTTGATGAAAGCGCGCCGATACTTTCCATTTATAGGGCACCTATTTGCCCG CAGTTATTAGGGAGATTGTT
Downstream 100 bases:
>100_bases TACCTAATCGCCAGTGAGTCCTTTACTGGTTTGAATTCAAGAAGGCCGTTCACCCTTTGGTGAGCGGTTTTTACCTTGTT ACTCATAACGCCTAAAGCGC
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MSYQQLPKDFLWGGAVAAHQVEGGWDKGGKGVSIADVLSGGSHGVDRVMTDGVLEGYRYPNHEAVDFYSHYKEDIALFAE MGFKCFRTSIAWTRIFPHGDEQQPNEAGLQFYDDMFDELLKYGIEPVITLSHFEMPWHLVKEYGGWKNRKVVDFFVKFSE VVMARYKSKVKYWMTFNEINNQRNWKYPLFGYCCSGVVFTEQENPEETLYQVLHHQFVASAKVVKLGHAINPEFKIGCMV AMVPLYPFSCHPDDMMYSVEAMRERYLFGDVHMRGYYPSYILQEWARRGFNIHMEEGDLETLRDGCADYMGLSYYMSNAV SAINPGSGNSLSGFEGSVPNPHVKASDWGWQIDPVGLRYSLSVLYERYQKPLFIVENGFGAIDKVAADGMVHDDYRIAYL KAHIEQMKKAVFEDGVDLMGYTPWGCIDCVSFTTGEYSKRYGFIYVDKNDDGTGTMARSRKLSFDWYKKVIASNGEVL
Sequences:
>Translated_478_residues MSYQQLPKDFLWGGAVAAHQVEGGWDKGGKGVSIADVLSGGSHGVDRVMTDGVLEGYRYPNHEAVDFYSHYKEDIALFAE MGFKCFRTSIAWTRIFPHGDEQQPNEAGLQFYDDMFDELLKYGIEPVITLSHFEMPWHLVKEYGGWKNRKVVDFFVKFSE VVMARYKSKVKYWMTFNEINNQRNWKYPLFGYCCSGVVFTEQENPEETLYQVLHHQFVASAKVVKLGHAINPEFKIGCMV AMVPLYPFSCHPDDMMYSVEAMRERYLFGDVHMRGYYPSYILQEWARRGFNIHMEEGDLETLRDGCADYMGLSYYMSNAV SAINPGSGNSLSGFEGSVPNPHVKASDWGWQIDPVGLRYSLSVLYERYQKPLFIVENGFGAIDKVAADGMVHDDYRIAYL KAHIEQMKKAVFEDGVDLMGYTPWGCIDCVSFTTGEYSKRYGFIYVDKNDDGTGTMARSRKLSFDWYKKVIASNGEVL >Mature_477_residues SYQQLPKDFLWGGAVAAHQVEGGWDKGGKGVSIADVLSGGSHGVDRVMTDGVLEGYRYPNHEAVDFYSHYKEDIALFAEM GFKCFRTSIAWTRIFPHGDEQQPNEAGLQFYDDMFDELLKYGIEPVITLSHFEMPWHLVKEYGGWKNRKVVDFFVKFSEV VMARYKSKVKYWMTFNEINNQRNWKYPLFGYCCSGVVFTEQENPEETLYQVLHHQFVASAKVVKLGHAINPEFKIGCMVA MVPLYPFSCHPDDMMYSVEAMRERYLFGDVHMRGYYPSYILQEWARRGFNIHMEEGDLETLRDGCADYMGLSYYMSNAVS AINPGSGNSLSGFEGSVPNPHVKASDWGWQIDPVGLRYSLSVLYERYQKPLFIVENGFGAIDKVAADGMVHDDYRIAYLK AHIEQMKKAVFEDGVDLMGYTPWGCIDCVSFTTGEYSKRYGFIYVDKNDDGTGTMARSRKLSFDWYKKVIASNGEVL
Specific function: Unknown
COG id: COG2723
COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 1 family [H]
Homologues:
Organism=Homo sapiens, GI110681710, Length=503, Percent_Identity=30.4174950298211, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI32481206, Length=495, Percent_Identity=28.2828282828283, Blast_Score=175, Evalue=7e-44, Organism=Homo sapiens, GI13273313, Length=491, Percent_Identity=27.0875763747454, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI24497614, Length=486, Percent_Identity=29.2181069958848, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI28376633, Length=494, Percent_Identity=26.9230769230769, Blast_Score=138, Evalue=1e-32, Organism=Escherichia coli, GI2367174, Length=473, Percent_Identity=78.6469344608879, Blast_Score=796, Evalue=0.0, Organism=Escherichia coli, GI1789070, Length=479, Percent_Identity=49.8956158663883, Blast_Score=493, Evalue=1e-140, Organism=Escherichia coli, GI2367270, Length=475, Percent_Identity=50.7368421052632, Blast_Score=479, Evalue=1e-136, Organism=Caenorhabditis elegans, GI17552856, Length=474, Percent_Identity=30.168776371308, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17539390, Length=480, Percent_Identity=28.75, Blast_Score=158, Evalue=6e-39, Organism=Drosophila melanogaster, GI21356577, Length=509, Percent_Identity=27.3084479371316, Blast_Score=150, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001360 - InterPro: IPR018120 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00232 Glyco_hydro_1 [H]
EC number: =3.2.1.86 [H]
Molecular weight: Translated: 54705; Mature: 54573
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1 ; PS00653 GLYCOSYL_HYDROL_F1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYQQLPKDFLWGGAVAAHQVEGGWDKGGKGVSIADVLSGGSHGVDRVMTDGVLEGYRYP CCHHHCCHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCC NHEAVDFYSHYKEDIALFAEMGFKCFRTSIAWTRIFPHGDEQQPNEAGLQFYDDMFDELL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHH KYGIEPVITLSHFEMPWHLVKEYGGWKNRKVVDFFVKFSEVVMARYKSKVKYWMTFNEIN HHCCCEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHC NQRNWKYPLFGYCCSGVVFTEQENPEETLYQVLHHQFVASAKVVKLGHAINPEFKIGCMV CCCCCCCCHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEE AMVPLYPFSCHPDDMMYSVEAMRERYLFGDVHMRGYYPSYILQEWARRGFNIHMEEGDLE EEHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHCCCEEEECCCCHH TLRDGCADYMGLSYYMSNAVSAINPGSGNSLSGFEGSVPNPHVKASDWGWQIDPVGLRYS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCHHHH LSVLYERYQKPLFIVENGFGAIDKVAADGMVHDDYRIAYLKAHIEQMKKAVFEDGVDLMG HHHHHHHHCCCEEEEECCCCCHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCC YTPWGCIDCVSFTTGEYSKRYGFIYVDKNDDGTGTMARSRKLSFDWYKKVIASNGEVL CCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure SYQQLPKDFLWGGAVAAHQVEGGWDKGGKGVSIADVLSGGSHGVDRVMTDGVLEGYRYP CHHHCCHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCC NHEAVDFYSHYKEDIALFAEMGFKCFRTSIAWTRIFPHGDEQQPNEAGLQFYDDMFDELL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHH KYGIEPVITLSHFEMPWHLVKEYGGWKNRKVVDFFVKFSEVVMARYKSKVKYWMTFNEIN HHCCCEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHC NQRNWKYPLFGYCCSGVVFTEQENPEETLYQVLHHQFVASAKVVKLGHAINPEFKIGCMV CCCCCCCCHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEE AMVPLYPFSCHPDDMMYSVEAMRERYLFGDVHMRGYYPSYILQEWARRGFNIHMEEGDLE EEHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHCCCEEEECCCCHH TLRDGCADYMGLSYYMSNAVSAINPGSGNSLSGFEGSVPNPHVKASDWGWQIDPVGLRYS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCHHHH LSVLYERYQKPLFIVENGFGAIDKVAADGMVHDDYRIAYLKAHIEQMKKAVFEDGVDLMG HHHHHHHHCCCEEEEECCCCCHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCC YTPWGCIDCVSFTTGEYSKRYGFIYVDKNDDGTGTMARSRKLSFDWYKKVIASNGEVL CCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]