| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is yeiW [H]
Identifier: 170025000
GI number: 170025000
Start: 3062630
End: 3062884
Strand: Reverse
Name: yeiW [H]
Synonym: YPK_2775
Alternate gene names: 170025000
Gene position: 3062884-3062630 (Counterclockwise)
Preceding gene: 170025003
Following gene: 170024996
Centisome position: 65.31
GC content: 54.12
Gene sequence:
>255_bases ATGGACTGTCGCTCAGATTGCGGAGCCTGCTGTATTGCACCTTCGATTTCCAGCCCGATCCCCGGTATGCCATTGGGCAA ACCCGCCAATACCCGGTGTGTACACTTGGATGACAACATGCGTTGTGGCATTTTTTACTCGCCATTGCGCCCTGCGGTAT GTGCCAGCTTGCAAGCAATGCGGGAAATGTGTCATCACACCCGTGAAGAGGCGTTGGTGTATTTGATTGCGCTGGAAGCG GTGACTGCGCCTTAA
Upstream 100 bases:
>100_bases AGAGTGCTGGTAGTTTAGGCGTGCGGTTGCTATTGTCCGGCCTTATTCACCGGTTATTACTCTCTTTGTTCTTATTTTAC TTGCTCACAGGAGCCTGCCG
Downstream 100 bases:
>100_bases ATGCGTTTTTACGATCGGCTGATTCTCTCCGCTGCCAGTACGTGTTCCTCTGCTTCTCCTGACCGCCCTCAGATGCTGGT ATATCCCGCATCGGCAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MDCRSDCGACCIAPSISSPIPGMPLGKPANTRCVHLDDNMRCGIFYSPLRPAVCASLQAMREMCHHTREEALVYLIALEA VTAP
Sequences:
>Translated_84_residues MDCRSDCGACCIAPSISSPIPGMPLGKPANTRCVHLDDNMRCGIFYSPLRPAVCASLQAMREMCHHTREEALVYLIALEA VTAP >Mature_84_residues MDCRSDCGACCIAPSISSPIPGMPLGKPANTRCVHLDDNMRCGIFYSPLRPAVCASLQAMREMCHHTREEALVYLIALEA VTAP
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0153 family [H]
Homologues:
Organism=Escherichia coli, GI87082060, Length=84, Percent_Identity=66.6666666666667, Blast_Score=120, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005358 [H]
Pfam domain/function: PF03692 UPF0153 [H]
EC number: NA
Molecular weight: Translated: 9079; Mature: 9079
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.5 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 15.5 %Cys+Met (Translated Protein) 9.5 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 15.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDCRSDCGACCIAPSISSPIPGMPLGKPANTRCVHLDDNMRCGIFYSPLRPAVCASLQAM CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHH REMCHHTREEALVYLIALEAVTAP HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDCRSDCGACCIAPSISSPIPGMPLGKPANTRCVHLDDNMRCGIFYSPLRPAVCASLQAM CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHH REMCHHTREEALVYLIALEAVTAP HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]