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The map label for this gene is psaC [H]

Identifier: 170024982

GI number: 170024982

Start: 3040926

End: 3043397

Strand: Reverse

Name: psaC [H]

Synonym: YPK_2757

Alternate gene names: 170024982

Gene position: 3043397-3040926 (Counterclockwise)

Preceding gene: 170024983

Following gene: 170024979

Centisome position: 64.9

GC content: 49.6

Gene sequence:

>2472_bases
ATGAGCACTTCATTTTTAGTGGGTGCCCAGCGTTATTCTTTTGATCCCAATCTGCTAGTGGATGGCAATAACAACACTGA
TACCTCGTTATTTGAACAGGGCAATGAATTACCGGGCACCTATTTGGTGGATATTATCTTGAATGGGAATAAAGTGGACT
CTACGAATGTGACATTTCATTCGGAGAAATCGCCATCAGGAGAGCCTTTCTTGCAATCTTGCTTAACCAAGGAGCAGCTA
TCCCGCTATGGTGTGGATGTTGATGCCTATCCCGAGTTATCTCCAGCATTAAAAAACTCACAGACAAACCCGTGTGTCAA
TTTAGCCGCTATCCCTCAGGCCAGTGAAGAGTTCCAATTTTATAATATGCAGTTGGTACTGAGTATTCCACAAGCGGCTT
TACGGCCTGAAGGTGAAGTGCCAATAGAACGCTGGGATGATGGTATTACGGCTTTTTTGCTGAACTACATGGCAAATATC
AGTGAAACCCAGTTTCGTCAAAATGGTGGATACCGGCGTTCACAATATATCCAGTTATATCCCGGTTTAAATTTGGGGGC
GTGGCGTGTTCGTAATGCGACCAACTGGAGTCAATCTGGCGATAGGGGGGGTAAATGGCAAAGTGCTTATACCTATGCCA
CTCGTGGGATTTATCGTTTAAAGAGTCGGGTGACCTTAGGGGAGAGTTACACCCCAGGTGATTTTTTCGACAGCATTCCC
TTTCGTGGCGTGATGTTGGGGGACGATCCTAATATGCAGCCAAGTAACCAGCGGGATTTTATACCGGTGGTGCGTGGTAT
TGCCCGTAGTCAGGCGCAGGTGGAAATCAGACAAAATGGTTATCTGATTTATAGTACGGTGGTGCCGCCGGGGCCGTTTG
AACTCTCTGACGTGATCCCGAGTAAATCAGGCAGTGACCTACATGTTAGGGTGCTGGAAAGTAACGGGGCATCGCAGGCG
TTTATTGTGCCTTATGAGGTGCCAGCCATTGCATTGCGCAAAGGGCATTTGCGATACAATCTGGTGGCAGGGCAGTATCG
CCCCGCCAATGCTGATGTTGAGACGCCTCCGGTCGCTCAGGCAACCGTCGCCTACGGCTTGCCGTGGAACTTGACCGCAT
TTATCGGTGAGCAGTGGTCGCGGCATTATCAGGCAACCTCTGCCGGATTAGGGGTGCTATTGGGGGAGTATGGCGCATTG
TCATCCAGTATCACGCAGGCAACCAGTCAGTATCACCATCAACAACCGGTTAAAGGGCAAGCCTGGGAGGTTCGATACAA
CAAAACCTTACAAGCCTCTGATACGTCATTTTCATTGGTGAATAGTCAATACAGCACTAATGGTTTCAGTACGTTATCTG
ATGTATTACAAAGTTACCGGCAGAGCGGGAGTGGCGATAATAGAGATAAAATTGACGAAAATTCTCGGTCAAGGGATTTG
CGTAACCAAATCAGTGCGGTCATCGGGCAGTCATTGGGCAAGTTTGGCTACCTGAACCTTAATTGGTCGCGGCAGGTCTA
CCGTGGGCCGATTCCGGCTAAGAATTCATTGGGAATACACTATAACCTCAATGTCGGTAATAGTTTTTGGGCACTGAGTT
GGGTGCAAAATGCGAATGAGAACAAGAATGATCGAATATTGAGTTTGTCTGTCAGTATTCCGCTGGGAGGTCATCACGAT
ACTTATGCTTCCTATAGAATGACATCTTCCAACGGGAGCAATGATCATGAGATAGAAATGTACGGCCAGGCTTTTGACTC
TCGCTTGAGTTGGAGTGTGCGTCAGGCAGAGCATTATGGTCAACCCAACTCAGGGCATAACAGCGGCTCACTCAGGTTGG
GCTGGCAGGGTTCCTATGGCAATATCGCGGGAAATTACTACTATACTCCGAGCATACGTCAGTTATCCGCTGATGTTTCC
GGAGGGGCGATCATCCATCGGCATGGGCTGACATTAGGGCCGCAAATCAATGGCACCTCCGTGCTGGTTGAAGTTCCGGG
CGTCGGCGGGGTTACCACCACAGAAGATCGCCGTCTGAAAACAGATTTTCGCGGTTACAGCATTGTGTCTGGCCTCTCTC
CTTATCAGGAGCACGATATCGTGTTGGAAACTGCAGATTTACCGCCGGATGCGGAGGTGGCAAAAACAGATACCAAGGTC
TTGCCGACCGAGGGGGCGATTGTTCGTGCCAGTTTTAGCCCGCAAATCGGGGCAAAGGCGCTGATGACGATCACCCGCGC
TAATGGCCAAACCATTCCGTTTGGTGCGATGGCGAGCTTGGTTAATCAGTCGGCCAATGCAGCCATTGTCGATGAAGGGG
GGAAAGCCTATCTAACCGGGTTACCGGAAACAGGGCAGTTATTGGTGCAATGGGGTAAAGATGCGGGCCAACAATGCCGG
GTGGATTACCAGCTCTCGCCAGCGGAAAAAGGTGATGCCGGGCTGTATATGCTCAGCGGAGTATGCCATTAA

Upstream 100 bases:

>100_bases
AAAGCACAGTCCAGTAAGTTTCTATTTATATTTTTCAGAAAATACCTGGGGTATTATTTTGAAAAAATTAATAGTTCAAT
TTACTACTATTACTCTATTG

Downstream 100 bases:

>100_bases
AGGCATCCGCGATGACACAATTCCCGTTAGGTTCAATTCCCGTCAGGTTCAATTCCCGCCAGGTTTACTGGCGGGCATTT
TCTACGTTACAACGAGGGCT

Product: fimbrial biogenesis outer membrane usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 823; Mature: 822

Protein sequence:

>823_residues
MSTSFLVGAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPSGEPFLQSCLTKEQL
SRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLSIPQAALRPEGEVPIERWDDGITAFLLNYMANI
SETQFRQNGGYRRSQYIQLYPGLNLGAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIP
FRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGSDLHVRVLESNGASQA
FIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAYGLPWNLTAFIGEQWSRHYQATSAGLGVLLGEYGAL
SSSITQATSQYHHQQPVKGQAWEVRYNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDL
RNQISAVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANENKNDRILSLSVSIPLGGHHD
TYASYRMTSSNGSNDHEIEMYGQAFDSRLSWSVRQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVS
GGAIIHRHGLTLGPQINGTSVLVEVPGVGGVTTTEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEVAKTDTKV
LPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQSANAAIVDEGGKAYLTGLPETGQLLVQWGKDAGQQCR
VDYQLSPAEKGDAGLYMLSGVCH

Sequences:

>Translated_823_residues
MSTSFLVGAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPSGEPFLQSCLTKEQL
SRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLSIPQAALRPEGEVPIERWDDGITAFLLNYMANI
SETQFRQNGGYRRSQYIQLYPGLNLGAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIP
FRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGSDLHVRVLESNGASQA
FIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAYGLPWNLTAFIGEQWSRHYQATSAGLGVLLGEYGAL
SSSITQATSQYHHQQPVKGQAWEVRYNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDL
RNQISAVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANENKNDRILSLSVSIPLGGHHD
TYASYRMTSSNGSNDHEIEMYGQAFDSRLSWSVRQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVS
GGAIIHRHGLTLGPQINGTSVLVEVPGVGGVTTTEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEVAKTDTKV
LPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQSANAAIVDEGGKAYLTGLPETGQLLVQWGKDAGQQCR
VDYQLSPAEKGDAGLYMLSGVCH
>Mature_822_residues
STSFLVGAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPSGEPFLQSCLTKEQLS
RYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLSIPQAALRPEGEVPIERWDDGITAFLLNYMANIS
ETQFRQNGGYRRSQYIQLYPGLNLGAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIPF
RGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGSDLHVRVLESNGASQAF
IVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAYGLPWNLTAFIGEQWSRHYQATSAGLGVLLGEYGALS
SSITQATSQYHHQQPVKGQAWEVRYNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDLR
NQISAVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANENKNDRILSLSVSIPLGGHHDT
YASYRMTSSNGSNDHEIEMYGQAFDSRLSWSVRQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSG
GAIIHRHGLTLGPQINGTSVLVEVPGVGGVTTTEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEVAKTDTKVL
PTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQSANAAIVDEGGKAYLTGLPETGQLLVQWGKDAGQQCRV
DYQLSPAEKGDAGLYMLSGVCH

Specific function: Involved in the export and assembly of psaA (pH 6) fimbrial subunits across the outer membrane [H]

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI1790772, Length=840, Percent_Identity=36.1904761904762, Blast_Score=473, Evalue=1e-134,
Organism=Escherichia coli, GI1787172, Length=856, Percent_Identity=35.1635514018692, Blast_Score=471, Evalue=1e-133,
Organism=Escherichia coli, GI1786744, Length=851, Percent_Identity=34.5475910693302, Blast_Score=449, Evalue=1e-127,
Organism=Escherichia coli, GI1789533, Length=831, Percent_Identity=35.7400722021661, Blast_Score=429, Evalue=1e-121,
Organism=Escherichia coli, GI1786332, Length=858, Percent_Identity=30.3030303030303, Blast_Score=312, Evalue=7e-86,
Organism=Escherichia coli, GI1788427, Length=824, Percent_Identity=25.9708737864078, Blast_Score=266, Evalue=5e-72,
Organism=Escherichia coli, GI87081778, Length=803, Percent_Identity=27.1481942714819, Blast_Score=231, Evalue=1e-61,
Organism=Escherichia coli, GI1789610, Length=819, Percent_Identity=25.5189255189255, Blast_Score=135, Evalue=8e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 90156; Mature: 90025

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSFLVGAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFH
CCCCEEEECCEECCCCCEEEECCCCCCHHHHHCCCCCCCEEEEEEEECCCEECCCEEEEE
SEKSPSGEPFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQF
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCEEE
YNMQLVLSIPQAALRPEGEVPIERWDDGITAFLLNYMANISETQFRQNGGYRRSQYIQLY
EEEEEEEECCHHHCCCCCCCCHHHHCCHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEE
PGLNLGAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIP
CCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCHHHHCCC
FRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIP
CCEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCHHHCCC
SKSGSDLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQ
CCCCCCEEEEEEECCCCCEEEEEEECCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCC
ATVAYGLPWNLTAFIGEQWSRHYQATSAGLGVLLGEYGALSSSITQATSQYHHQQPVKGQ
EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCC
AWEVRYNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDL
EEEEEECCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
RNQISAVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANE
HHHHHHHHHHHHCCCEEEEECCCCCEECCCCCCCCCCEEEEEECCCCCEEEEEEHHCCCC
NKNDRILSLSVSIPLGGHHDTYASYRMTSSNGSNDHEIEMYGQAFDSRLSWSVRQAEHYG
CCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC
QPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSGGAIIHRHGLTLGPQINGTS
CCCCCCCCCEEEEEEECCCCCCCCCEEECCCHHHHCCCCCCCEEEEECCCEECCCCCCCE
VLVEVPGVGGVTTTEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEVAKTDTKV
EEEECCCCCCCCCCCCCEEHHCCCCEEEECCCCCCCCCCEEEEECCCCCCCCHHCCCCEE
LPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQSANAAIVDEGGKAYLTG
ECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEC
LPETGQLLVQWGKDAGQQCRVDYQLSPAEKGDAGLYMLSGVCH
CCCCCHHHEEECCCCCCEEEEEEEECCCCCCCCCEEEECCCCC
>Mature Secondary Structure 
STSFLVGAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFH
CCCEEEECCEECCCCCEEEECCCCCCHHHHHCCCCCCCEEEEEEEECCCEECCCEEEEE
SEKSPSGEPFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQF
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCEEE
YNMQLVLSIPQAALRPEGEVPIERWDDGITAFLLNYMANISETQFRQNGGYRRSQYIQLY
EEEEEEEECCHHHCCCCCCCCHHHHCCHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEE
PGLNLGAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIP
CCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCHHHHCCC
FRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIP
CCEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCHHHCCC
SKSGSDLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQ
CCCCCCEEEEEEECCCCCEEEEEEECCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCC
ATVAYGLPWNLTAFIGEQWSRHYQATSAGLGVLLGEYGALSSSITQATSQYHHQQPVKGQ
EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCC
AWEVRYNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDL
EEEEEECCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
RNQISAVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANE
HHHHHHHHHHHHCCCEEEEECCCCCEECCCCCCCCCCEEEEEECCCCCEEEEEEHHCCCC
NKNDRILSLSVSIPLGGHHDTYASYRMTSSNGSNDHEIEMYGQAFDSRLSWSVRQAEHYG
CCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC
QPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSGGAIIHRHGLTLGPQINGTS
CCCCCCCCCEEEEEEECCCCCCCCCEEECCCHHHHCCCCCCCEEEEECCCEECCCCCCCE
VLVEVPGVGGVTTTEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEVAKTDTKV
EEEECCCCCCCCCCCCCEEHHCCCCEEEECCCCCCCCCCEEEEECCCCCCCCHHCCCCEE
LPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQSANAAIVDEGGKAYLTG
ECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEC
LPETGQLLVQWGKDAGQQCRVDYQLSPAEKGDAGLYMLSGVCH
CCCCCHHHEEECCCCCCEEEEEEEECCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430; 8100346 [H]