Click here to switch to the map view.

The map label for this gene is yeiE [H]

Identifier: 170024979

GI number: 170024979

Start: 3037200

End: 3038072

Strand: Reverse

Name: yeiE [H]

Synonym: YPK_2754

Alternate gene names: 170024979

Gene position: 3038072-3037200 (Counterclockwise)

Preceding gene: 170024982

Following gene: 170024978

Centisome position: 64.79

GC content: 50.74

Gene sequence:

>873_bases
ATGCATATAACCTTGCGTCAACTTGAAGTCTTTACTGAGGTACTAAAAAGTGGCTCAACGACCCAAGCCTCCGTGGTGCT
TGCGCTTTCACAATCAGCCGTTAGCGCAGCATTGGCGGATTTGGAAGGGCAACTTGGGGTGCAGCTTTTTGACCGCGTGG
GTAAGCGGTTAGTCACAAATGAGCATGGGCGATTGCTTTATCCCAAAGCGTTGGCATTACTCGATCAGGCCATCGAAATC
GAACAGCTGTTTTTGCATGATTTGGGCGCATTACGCATCGCGGCCAGCAGTACGATTGGTAATTACATGCTACCGGGGAT
GATTGCCAAATATCGCCGTGACTTCCCCGGAACACCTTTAGAGCTGAATATCGGTAATAGCCAGGATGTGATCGAAGCTG
TCGCCGACTTTCGCGGTGACCTTGGCCTGATTGAAGGGCCGTGTCATATGCCAGAATTGGTCACGCAAAATTGGCTACGG
GACGAGCTAGTGGTGTTTGCCGCCCCTGATAGCCCCTTGTGCCATAAGGCGCTAACGTTAGTCGACCTTGCTGATGCCGA
CTGGATTTTACGTGAGCGTGGCTCAGGAACGCGTGAAGTTCTCGATCATTTACTCTTGGCACAGTTACCCCACTTCAAGT
TAGTGATGGAGTTGGGTAACTCCGAGGCAATAAAGCGCGCTGTTCGCTACGGGATGGGGGTCAGTTGCCTTTCGCGGCGA
GTGATTGCTGATCAACTCGCCAGCGGTGAGTTGGTCGAGCTTAATATTCCTTTACCGCCCTTAATTCGCACCTTGTATCT
GATCCACCATCGGCAAAAACATATCTCCAACGCTTTGCTGCGCTTTCTTAGTTATTGTCAGGAAGAAGAGTAA

Upstream 100 bases:

>100_bases
AAAGTGTTAGTCTTATACGGTCATTGAGGCGATATAATCACTTCGTCAATAACCGCGTCCCCTTTTATTATTGTTCCTCT
TTATTACTACAGAGAACGTT

Downstream 100 bases:

>100_bases
AATGCGCCACTGCAGCAGTGTGTGCGACGTGTTTTATGCTGATGACAGGCTTTATCGCGGTAAAGTGTTTTATACCAGTA
GGGTGAGTTTTTTCGGTCAG

Product: putative DNA-binding transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MHITLRQLEVFTEVLKSGSTTQASVVLALSQSAVSAALADLEGQLGVQLFDRVGKRLVTNEHGRLLYPKALALLDQAIEI
EQLFLHDLGALRIAASSTIGNYMLPGMIAKYRRDFPGTPLELNIGNSQDVIEAVADFRGDLGLIEGPCHMPELVTQNWLR
DELVVFAAPDSPLCHKALTLVDLADADWILRERGSGTREVLDHLLLAQLPHFKLVMELGNSEAIKRAVRYGMGVSCLSRR
VIADQLASGELVELNIPLPPLIRTLYLIHHRQKHISNALLRFLSYCQEEE

Sequences:

>Translated_290_residues
MHITLRQLEVFTEVLKSGSTTQASVVLALSQSAVSAALADLEGQLGVQLFDRVGKRLVTNEHGRLLYPKALALLDQAIEI
EQLFLHDLGALRIAASSTIGNYMLPGMIAKYRRDFPGTPLELNIGNSQDVIEAVADFRGDLGLIEGPCHMPELVTQNWLR
DELVVFAAPDSPLCHKALTLVDLADADWILRERGSGTREVLDHLLLAQLPHFKLVMELGNSEAIKRAVRYGMGVSCLSRR
VIADQLASGELVELNIPLPPLIRTLYLIHHRQKHISNALLRFLSYCQEEE
>Mature_290_residues
MHITLRQLEVFTEVLKSGSTTQASVVLALSQSAVSAALADLEGQLGVQLFDRVGKRLVTNEHGRLLYPKALALLDQAIEI
EQLFLHDLGALRIAASSTIGNYMLPGMIAKYRRDFPGTPLELNIGNSQDVIEAVADFRGDLGLIEGPCHMPELVTQNWLR
DELVVFAAPDSPLCHKALTLVDLADADWILRERGSGTREVLDHLLLAQLPHFKLVMELGNSEAIKRAVRYGMGVSCLSRR
VIADQLASGELVELNIPLPPLIRTLYLIHHRQKHISNALLRFLSYCQEEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=286, Percent_Identity=73.7762237762238, Blast_Score=437, Evalue=1e-124,
Organism=Escherichia coli, GI87082132, Length=294, Percent_Identity=26.8707482993197, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1788748, Length=294, Percent_Identity=27.891156462585, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI157672245, Length=284, Percent_Identity=28.5211267605634, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1788296, Length=293, Percent_Identity=28.3276450511945, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1789204, Length=275, Percent_Identity=29.8181818181818, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1787530, Length=264, Percent_Identity=26.1363636363636, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1786401, Length=298, Percent_Identity=25.1677852348993, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788297, Length=242, Percent_Identity=24.7933884297521, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1789639, Length=125, Percent_Identity=32.8, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789506, Length=197, Percent_Identity=26.3959390862944, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787601, Length=226, Percent_Identity=24.3362831858407, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1787879, Length=264, Percent_Identity=26.8939393939394, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787806, Length=170, Percent_Identity=30.5882352941176, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI145693105, Length=294, Percent_Identity=24.1496598639456, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32140; Mature: 32140

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHITLRQLEVFTEVLKSGSTTQASVVLALSQSAVSAALADLEGQLGVQLFDRVGKRLVTN
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
EHGRLLYPKALALLDQAIEIEQLFLHDLGALRIAASSTIGNYMLPGMIAKYRRDFPGTPL
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCE
ELNIGNSQDVIEAVADFRGDLGLIEGPCHMPELVTQNWLRDELVVFAAPDSPLCHKALTL
EEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCEEEEECCCCHHHHHHHHH
VDLADADWILRERGSGTREVLDHLLLAQLPHFKLVMELGNSEAIKRAVRYGMGVSCLSRR
HHHCCCHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHH
VIADQLASGELVELNIPLPPLIRTLYLIHHRQKHISNALLRFLSYCQEEE
HHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHITLRQLEVFTEVLKSGSTTQASVVLALSQSAVSAALADLEGQLGVQLFDRVGKRLVTN
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
EHGRLLYPKALALLDQAIEIEQLFLHDLGALRIAASSTIGNYMLPGMIAKYRRDFPGTPL
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCE
ELNIGNSQDVIEAVADFRGDLGLIEGPCHMPELVTQNWLRDELVVFAAPDSPLCHKALTL
EEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCEEEEECCCCHHHHHHHHH
VDLADADWILRERGSGTREVLDHLLLAQLPHFKLVMELGNSEAIKRAVRYGMGVSCLSRR
HHHCCCHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHH
VIADQLASGELVELNIPLPPLIRTLYLIHHRQKHISNALLRFLSYCQEEE
HHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]