| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is ybjC [C]
Identifier: 170024957
GI number: 170024957
Start: 3012734
End: 3013048
Strand: Reverse
Name: ybjC [C]
Synonym: YPK_2732
Alternate gene names: 170024957
Gene position: 3013048-3012734 (Counterclockwise)
Preceding gene: 170024965
Following gene: 170024956
Centisome position: 64.25
GC content: 47.94
Gene sequence:
>315_bases ATGCGCTCGTTAGGAAATATGCCCCGGATTGTGATCATTTCAGAAGTACTGGGGTTGTTGTTATTGGTTGTTGCTTATTT AAGCATCAATAATTATTTGTCATTGCCAGGGGAAATGGGGACACCAACGGCTGCCATTATGATGATTTTTGTGGGGGTCG GCCTGATGATCCCGGCGGCAGTGTGTATCGTCTGGCGGGTAGCCAGCGGTTTTGGTCCATTATTGGGCAGTGCTGACAGA ATATCGACGCCACAGAAGGCGTCAGAGGAAAAACTGGCGGCGAAAAGTAAAAAATCGGGTCAGGATAACCACTAA
Upstream 100 bases:
>100_bases TTCAAATCGGGTTTCCAAGGATTTGTCTCTCGCTTGCCGCCTTCCGCAACTCGAATTATGTTGGGTATAAACGCTCATAC AGAGCCTGTCGGAGGAAAAG
Downstream 100 bases:
>100_bases GATTTTATAAGCACATTGAGAATATCTAAGCCGAGGAACGGCCCAGATATCAAATTAGTCGGGATTGATCGTAGCGCTAT CGGCCAATATTCCGTAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MRSLGNMPRIVIISEVLGLLLLVVAYLSINNYLSLPGEMGTPTAAIMMIFVGVGLMIPAAVCIVWRVASGFGPLLGSADR ISTPQKASEEKLAAKSKKSGQDNH
Sequences:
>Translated_104_residues MRSLGNMPRIVIISEVLGLLLLVVAYLSINNYLSLPGEMGTPTAAIMMIFVGVGLMIPAAVCIVWRVASGFGPLLGSADR ISTPQKASEEKLAAKSKKSGQDNH >Mature_104_residues MRSLGNMPRIVIISEVLGLLLLVVAYLSINNYLSLPGEMGTPTAAIMMIFVGVGLMIPAAVCIVWRVASGFGPLLGSADR ISTPQKASEEKLAAKSKKSGQDNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787074, Length=104, Percent_Identity=39.4230769230769, Blast_Score=61, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10997; Mature: 10997
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLGNMPRIVIISEVLGLLLLVVAYLSINNYLSLPGEMGTPTAAIMMIFVGVGLMIPAA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH VCIVWRVASGFGPLLGSADRISTPQKASEEKLAAKSKKSGQDNH HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRSLGNMPRIVIISEVLGLLLLVVAYLSINNYLSLPGEMGTPTAAIMMIFVGVGLMIPAA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH VCIVWRVASGFGPLLGSADRISTPQKASEEKLAAKSKKSGQDNH HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA