Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
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Accession | NC_010465 |
Length | 4,689,441 |
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The map label for this gene is 170024941
Identifier: 170024941
GI number: 170024941
Start: 2997425
End: 2998795
Strand: Reverse
Name: 170024941
Synonym: YPK_2716
Alternate gene names: NA
Gene position: 2998795-2997425 (Counterclockwise)
Preceding gene: 170024942
Following gene: 170024940
Centisome position: 63.95
GC content: 52.95
Gene sequence:
>1371_bases ATGCATAACACCCTGCCAACCTTGATTCTGGGGGCCGGGCCTGCGGCTATCCAACTTGCGGTGGATATTAGTGCTACAGG TGATGCTCGGTTGGGGCTCTATAATCGGCCCAGCACGAAAGGCGAACGGTTAAAGCAGTATCTGGCACTCACGCCGACCC TTTATTTGCAGGGTACCGGCAAGGCACAAGCGACCCAGAAAGAGAGCAGTGTCACGATTGATTGCTATATCGATCAATTG GCGCAGGCGGTTGGTGATTGGCAACGTTTGATTTTGGCAGTCCCTGCCGACCACTATTACGCCGTCCTACAACAGATTCC GTGGGCCGCGTTACCACAATTAAAGTCAGTGATTTTACTGTCCTCTTCGATGGGTTCCGGCCTGATGGTGCAGAATCTGT TAAACGCCGCGGGGAAGCGCGATGTCGAGGTCATCAGCCTGTCCAGTTATTATGCGGATACTAAATATATTCGCGCTGAA ACCCAAGACATTAGCGCTAATACCCAAGACATTAATGCTGGAACCCAAGACATTGGCGCTATACAGCCTTATCGGGCGTA TACCAAAGCATTTAAACAGCGGATATATCTGGCCAATCAGTGGGGTAATGCGGGATCGGCAGAGATGAGCTGGTTAACGG CGGTATTAGCCCGCCACCACATTGACACCTTACCGTGTTCTAACTTGTTGGCCGCCGAGCGTTTTAGCATTACCAATTAT GTCCATCCCCCTTTGGCGCTGGCGGATACCACGTTGCAGGCGCTGTTCTATCCAGAGCAACGTAGCCAGTATCTGTATAA AACCCAACCAGAAGGGCCGGTCTGTCCGGCGGTGATTGCGGATTTAGCGGGTTTGGCCGATGACTATAAAAGGCTCCTCA ACCGGCTAGGGGTGGAAGAAATCAACTTGCTACGTTTTCTCAATGACGATAACTATCCGGTGCCTGCCTCCATGGTCAGT CGTCGCTGGATTGACGAATTTCCACAGCTTCCCCCTCTTGAGCAGCAATACGCACTGTTTGTTCGTTATACCGCCTTGTT AGTGGACCCGTACTCTACACCGGATGAACAAGGCCGATTCTATGACTTTTCGGCGGTCAAGGTGGCCACGGTATATCAAG ACGCGAATGCGCTGTGGCATTTGCCGCGAGTGCCGCTGGAGGATGTTCACAAATTGCGAACGCTGCTATTACTGGCGGGC GCGCTGGATGTGGTGATGCCCACAGCGCAGCGGCTGCTACAGCGATTCCAGCAGGCGCTCAAGGCGTTTATTGACCGGGT CGGTGAGGAACATTGCCATCCCTCTTTATTGGGGGACGATTGTGACAGGCAGGCGGCCATCATCGAACAACAATGGCGGA GCCAGACATGA
Upstream 100 bases:
>100_bases TGCCCTTATTGCCATGAGGCGAACTGTTCACATTGGCGCACCGCCAGTAAACCGGTGACCACCGGGCTTTATGACCTTAT CATTTTGGAACCTAATCATC
Downstream 100 bases:
>100_bases ACCAAGGCGCGTTATTGGCTATTCTCGCCTCCCTGATTTTCAGCGTGATGAATGTGTTAGTCAAAACCATCGCTGATGAA ATTCCTACCGGTGAGATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MHNTLPTLILGAGPAAIQLAVDISATGDARLGLYNRPSTKGERLKQYLALTPTLYLQGTGKAQATQKESSVTIDCYIDQL AQAVGDWQRLILAVPADHYYAVLQQIPWAALPQLKSVILLSSSMGSGLMVQNLLNAAGKRDVEVISLSSYYADTKYIRAE TQDISANTQDINAGTQDIGAIQPYRAYTKAFKQRIYLANQWGNAGSAEMSWLTAVLARHHIDTLPCSNLLAAERFSITNY VHPPLALADTTLQALFYPEQRSQYLYKTQPEGPVCPAVIADLAGLADDYKRLLNRLGVEEINLLRFLNDDNYPVPASMVS RRWIDEFPQLPPLEQQYALFVRYTALLVDPYSTPDEQGRFYDFSAVKVATVYQDANALWHLPRVPLEDVHKLRTLLLLAG ALDVVMPTAQRLLQRFQQALKAFIDRVGEEHCHPSLLGDDCDRQAAIIEQQWRSQT
Sequences:
>Translated_456_residues MHNTLPTLILGAGPAAIQLAVDISATGDARLGLYNRPSTKGERLKQYLALTPTLYLQGTGKAQATQKESSVTIDCYIDQL AQAVGDWQRLILAVPADHYYAVLQQIPWAALPQLKSVILLSSSMGSGLMVQNLLNAAGKRDVEVISLSSYYADTKYIRAE TQDISANTQDINAGTQDIGAIQPYRAYTKAFKQRIYLANQWGNAGSAEMSWLTAVLARHHIDTLPCSNLLAAERFSITNY VHPPLALADTTLQALFYPEQRSQYLYKTQPEGPVCPAVIADLAGLADDYKRLLNRLGVEEINLLRFLNDDNYPVPASMVS RRWIDEFPQLPPLEQQYALFVRYTALLVDPYSTPDEQGRFYDFSAVKVATVYQDANALWHLPRVPLEDVHKLRTLLLLAG ALDVVMPTAQRLLQRFQQALKAFIDRVGEEHCHPSLLGDDCDRQAAIIEQQWRSQT >Mature_456_residues MHNTLPTLILGAGPAAIQLAVDISATGDARLGLYNRPSTKGERLKQYLALTPTLYLQGTGKAQATQKESSVTIDCYIDQL AQAVGDWQRLILAVPADHYYAVLQQIPWAALPQLKSVILLSSSMGSGLMVQNLLNAAGKRDVEVISLSSYYADTKYIRAE TQDISANTQDINAGTQDIGAIQPYRAYTKAFKQRIYLANQWGNAGSAEMSWLTAVLARHHIDTLPCSNLLAAERFSITNY VHPPLALADTTLQALFYPEQRSQYLYKTQPEGPVCPAVIADLAGLADDYKRLLNRLGVEEINLLRFLNDDNYPVPASMVS RRWIDEFPQLPPLEQQYALFVRYTALLVDPYSTPDEQGRFYDFSAVKVATVYQDANALWHLPRVPLEDVHKLRTLLLLAG ALDVVMPTAQRLLQRFQQALKAFIDRVGEEHCHPSLLGDDCDRQAAIIEQQWRSQT
Specific function: Unknown
COG id: COG4408
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50861; Mature: 50861
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNTLPTLILGAGPAAIQLAVDISATGDARLGLYNRPSTKGERLKQYLALTPTLYLQGTG CCCCCCEEEEECCCCEEEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHCCEEEEEECC KAQATQKESSVTIDCYIDQLAQAVGDWQRLILAVPADHYYAVLQQIPWAALPQLKSVILL CCCCCCCCCCEEEHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCHHHHHHHHHHHHH SSSMGSGLMVQNLLNAAGKRDVEVISLSSYYADTKYIRAETQDISANTQDINAGTQDIGA HCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHCC IQPYRAYTKAFKQRIYLANQWGNAGSAEMSWLTAVLARHHIDTLPCSNLLAAERFSITNY CCHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC VHPPLALADTTLQALFYPEQRSQYLYKTQPEGPVCPAVIADLAGLADDYKRLLNRLGVEE CCCCHHHHHHHHHHHCCCHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH INLLRFLNDDNYPVPASMVSRRWIDEFPQLPPLEQQYALFVRYTALLVDPYSTPDEQGRF HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCE YDFSAVKVATVYQDANALWHLPRVPLEDVHKLRTLLLLAGALDVVMPTAQRLLQRFQQAL EEECCEEEEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAFIDRVGEEHCHPSLLGDDCDRQAAIIEQQWRSQT HHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MHNTLPTLILGAGPAAIQLAVDISATGDARLGLYNRPSTKGERLKQYLALTPTLYLQGTG CCCCCCEEEEECCCCEEEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHCCEEEEEECC KAQATQKESSVTIDCYIDQLAQAVGDWQRLILAVPADHYYAVLQQIPWAALPQLKSVILL CCCCCCCCCCEEEHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCHHHHHHHHHHHHH SSSMGSGLMVQNLLNAAGKRDVEVISLSSYYADTKYIRAETQDISANTQDINAGTQDIGA HCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHCC IQPYRAYTKAFKQRIYLANQWGNAGSAEMSWLTAVLARHHIDTLPCSNLLAAERFSITNY CCHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC VHPPLALADTTLQALFYPEQRSQYLYKTQPEGPVCPAVIADLAGLADDYKRLLNRLGVEE CCCCHHHHHHHHHHHCCCHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH INLLRFLNDDNYPVPASMVSRRWIDEFPQLPPLEQQYALFVRYTALLVDPYSTPDEQGRF HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCE YDFSAVKVATVYQDANALWHLPRVPLEDVHKLRTLLLLAGALDVVMPTAQRLLQRFQQAL EEECCEEEEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAFIDRVGEEHCHPSLLGDDCDRQAAIIEQQWRSQT HHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA