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The map label for this gene is 170024842

Identifier: 170024842

GI number: 170024842

Start: 2873801

End: 2874001

Strand: Reverse

Name: 170024842

Synonym: YPK_2617

Alternate gene names: NA

Gene position: 2874001-2873801 (Counterclockwise)

Preceding gene: 170024844

Following gene: 170024841

Centisome position: 61.29

GC content: 49.25

Gene sequence:

>201_bases
ATGCCGTTAATCCGAAAAACCTTTAAACGCCTACATTATCCCGTCGATATCATCGTGCAATGTGTTTGCTGGTATCTGGC
TGATGCCTTGAGTCTGCGGAATCTCGAAGAGACGATGGCAGAGCGCGGTGTTATCGTTGACCATTCTACACTGCACTGCA
CTGCACCGCTGGGTTATACGTCTGGTTCCACTGCTGGATAA

Upstream 100 bases:

>100_bases
CTTAGACTAAATTGGTTGATATTGGGATAGATAAACGGTTCTGTCGCATTAAGGCGCAGTTCGGTAACATGCTGTTTTTT
TTTGGCGATGCCACCTACCC

Downstream 100 bases:

>100_bases
AGCCTTTCGTCGACATAAGTGCACCGTGGTGCGCCGATGGAGAATGGACGAAACCTACATCAAAATTAAAGGCCAGTGGA
AATATCTGTACCGCGCAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Catalytic Region; ISYps1 Transposase; Integrase Catalytic Subunit

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MPLIRKTFKRLHYPVDIIVQCVCWYLADALSLRNLEETMAERGVIVDHSTLHCTAPLGYTSGSTAG

Sequences:

>Translated_66_residues
MPLIRKTFKRLHYPVDIIVQCVCWYLADALSLRNLEETMAERGVIVDHSTLHCTAPLGYTSGSTAG
>Mature_65_residues
PLIRKTFKRLHYPVDIIVQCVCWYLADALSLRNLEETMAERGVIVDHSTLHCTAPLGYTSGSTAG

Specific function: Unknown

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7364; Mature: 7232

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLIRKTFKRLHYPVDIIVQCVCWYLADALSLRNLEETMAERGVIVDHSTLHCTAPLGYT
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCEEEECCCCCC
SGSTAG
CCCCCC
>Mature Secondary Structure 
PLIRKTFKRLHYPVDIIVQCVCWYLADALSLRNLEETMAERGVIVDHSTLHCTAPLGYT
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCEEEECCCCCC
SGSTAG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA