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The map label for this gene is 170024841

Identifier: 170024841

GI number: 170024841

Start: 2873470

End: 2873757

Strand: Reverse

Name: 170024841

Synonym: YPK_2616

Alternate gene names: NA

Gene position: 2873757-2873470 (Counterclockwise)

Preceding gene: 170024842

Following gene: 170024840

Centisome position: 61.28

GC content: 48.61

Gene sequence:

>288_bases
ATGGACGAAACCTACATCAAAATTAAAGGCCAGTGGAAATATCTGTACCGCGCAGTGGACACTGCAGGCCAGACCATCGA
TTTCCTGTTGACTGCCAAACGGGATGCAGCAGCGGCGTTGCGCTTCTTTCGTAAGGCCATTCGACACCAAGGTGAACCGG
AGGTCGTGACTATCGATAAGAGTGGTGCTAATACAGCGGCGCTGGTCACGCTCAACGCAGATAAAGCAGAAGATGAAGCG
ATTACCATCAAGCAAATCAGTATTGACAAACAAAATGAAGCAAGATAG

Upstream 100 bases:

>100_bases
TCTACACTGCACTGCACTGCACCGCTGGGTTATACGTCTGGTTCCACTGCTGGATAAAGCCTTTCGTCGACATAAGTGCA
CCGTGGTGCGCCGATGGAGA

Downstream 100 bases:

>100_bases
TTTTACATGTAATAATAAATAGCAGTTATATATATTTTTAATATCATTTATTTTTATTTACAGAATATGGTGAGCATAGG
GAATGATTTTAATATCCTAG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MDETYIKIKGQWKYLYRAVDTAGQTIDFLLTAKRDAAAALRFFRKAIRHQGEPEVVTIDKSGANTAALVTLNADKAEDEA
ITIKQISIDKQNEAR

Sequences:

>Translated_95_residues
MDETYIKIKGQWKYLYRAVDTAGQTIDFLLTAKRDAAAALRFFRKAIRHQGEPEVVTIDKSGANTAALVTLNADKAEDEA
ITIKQISIDKQNEAR
>Mature_95_residues
MDETYIKIKGQWKYLYRAVDTAGQTIDFLLTAKRDAAAALRFFRKAIRHQGEPEVVTIDKSGANTAALVTLNADKAEDEA
ITIKQISIDKQNEAR

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 10641; Mature: 10641

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDETYIKIKGQWKYLYRAVDTAGQTIDFLLTAKRDAAAALRFFRKAIRHQGEPEVVTIDK
CCCCEEEEECCCEEEHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEC
SGANTAALVTLNADKAEDEAITIKQISIDKQNEAR
CCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCC
>Mature Secondary Structure
MDETYIKIKGQWKYLYRAVDTAGQTIDFLLTAKRDAAAALRFFRKAIRHQGEPEVVTIDK
CCCCEEEEECCCEEEHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEC
SGANTAALVTLNADKAEDEAITIKQISIDKQNEAR
CCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2548057; 2365064 [H]