| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170024823
Identifier: 170024823
GI number: 170024823
Start: 2855039
End: 2855605
Strand: Reverse
Name: 170024823
Synonym: YPK_2598
Alternate gene names: NA
Gene position: 2855605-2855039 (Counterclockwise)
Preceding gene: 170024824
Following gene: 170024822
Centisome position: 60.89
GC content: 54.85
Gene sequence:
>567_bases ATGCACCACCCCGACTTCCAGCGGGTGGAATCGACCTGGCGTGGTGTGAAGTCGCTGATCGATCAGACCGATTTCCGCCA GAACGTGCGCATCGAGCTGCTGGATATCAGTAAAGATAATCTGGTGCAGGATTTTGAAGATGCCCCGGAAATTTCACAAA GCGGTTTATACGCCCAGACCTATATTCAGGAATACGACACCCCCGGCGGTGAACCGATTGCTGCGGCGATTTCCAACTAC GAGTTTGACCGTGGCCCGCAGGATATCGCCTTATTGCGCAATATCTCCAAAGTGGCGGCTGCAGCCCATATGCCGTTTAT CGGCTCAGTGGGTCCGGCGTTCTTTGGTAAAGAGAACATGGAAGAGGTGGCGGCCATCAAAGATATCGGCAACTACTTTG ACCGTGCCGAATACATCAAATGGAAAGCCTTCCGCGACTCGGATGATTCCCGCTATATCGGCCTGACCATGCCGCGCGTG CTGGGGCGTTTGCCTTATGGGCCAGACACCGTGCCGGTGCGCAGCTTTACCCGACTGCAACAGCACGCAGTCTGCATGGG ATCTTAA
Upstream 100 bases:
>100_bases GAAGCAGTCGGCGAAGAAAGTAGAAAAACTGGATAAAACCCTGCTGGACGGCCATATTGCCGCACTGGATGACCAAATCA GCCGCCAGTTGGATGCGGTA
Downstream 100 bases:
>100_bases GCTGGTGGCGCAAGATAAGGATGAAACCAGCCAACTGCTGGTGAGCCAGTATGGTTTGGCGGGAACGACAGATACTGCTT CGTCAATAACGGAAGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MHHPDFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDNLVQDFEDAPEISQSGLYAQTYIQEYDTPGGEPIAAAISNY EFDRGPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENMEEVAAIKDIGNYFDRAEYIKWKAFRDSDDSRYIGLTMPRV LGRLPYGPDTVPVRSFTRLQQHAVCMGS
Sequences:
>Translated_188_residues MHHPDFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDNLVQDFEDAPEISQSGLYAQTYIQEYDTPGGEPIAAAISNY EFDRGPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENMEEVAAIKDIGNYFDRAEYIKWKAFRDSDDSRYIGLTMPRV LGRLPYGPDTVPVRSFTRLQQHAVCMGS >Mature_188_residues MHHPDFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDNLVQDFEDAPEISQSGLYAQTYIQEYDTPGGEPIAAAISNY EFDRGPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENMEEVAAIKDIGNYFDRAEYIKWKAFRDSDDSRYIGLTMPRV LGRLPYGPDTVPVRSFTRLQQHAVCMGS
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21250; Mature: 21250
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHPDFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDNLVQDFEDAPEISQSGLYAQT CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCHHHCCCHHHH YIQEYDTPGGEPIAAAISNYEFDRGPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENM HHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCH EEVAAIKDIGNYFDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFTRLQ HHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEHHHHHHCCCCCCCCCCHHHHHHHH QHAVCMGS HHHHHCCC >Mature Secondary Structure MHHPDFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDNLVQDFEDAPEISQSGLYAQT CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCHHHCCCHHHH YIQEYDTPGGEPIAAAISNYEFDRGPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENM HHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCH EEVAAIKDIGNYFDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFTRLQ HHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEHHHHHHCCCCCCCCCCHHHHHHHH QHAVCMGS HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA