| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024821
Identifier: 170024821
GI number: 170024821
Start: 2853902
End: 2854720
Strand: Reverse
Name: 170024821
Synonym: YPK_2596
Alternate gene names: NA
Gene position: 2854720-2853902 (Counterclockwise)
Preceding gene: 170024822
Following gene: 170024820
Centisome position: 60.88
GC content: 45.3
Gene sequence:
>819_bases ATGAACGAAAAACATCAACAGCGGCATGTCGAACAAGAGATGGTTCAGGCCGCCATAAACGAACATTTTTCCCGACAGTC CCGCCTTACTCCAAGATTAAAAAATTGGGAAGAAGATTTACCGGAGAATAATGAAGAACAGACGGTTCCCGGCCAGTTGG TTCAGGTAACAGAAATCAATGATATCTGGATGGAACTCCCACGCTATGAAAATATCATGTGGGGAGGGGCTTGGTTGGGG ATAATATCATCAATAGTACCTATGGTCGTAATGATATATATAGGCATTGACATTCTTTCATCAGAGTTTGATATCACGCT TTTTCTTATAATGTTACTTGGTTTGTTTTTTATGCTTTCAATGTTTTTATTAAACTTGAGGATGGCTCTTTTTGTTCCCC GAGACCAACCTATTCGCTTTAACCGCAAGCGTCAAAAAGTCTATGTCTTCGATTATCACCGGAAACAGTGGAATCCCTGG GTGAAATGGCCCACCACGATCAAGGTATTTGACTGGGCGGATATTCACGGCGAGATAAGCCACGAATCGGACCGTTACGA TCAGGGGTTCCGGCTCTATTGTGCAGTATGTAAACCCGGTACTTGGGACGTGGCTGAACGTTTTATTCTCAGCCGGGCAC TGCGCCATATCGTGACTCAACGCAAATTATGGAGTCACTGCTGTCAGTATATGCAACATAAACCCGTGGTGATGGACCCC CTTGAGCCGGGGCGGCCTGATAACTGGAAACCGCGTAAAAACATGTGTTGGTCGGAAGATATTGATCGGGAATCGACTAC TGCACCGGCACCGGATTAA
Upstream 100 bases:
>100_bases TTCAGCAGGCCGTGCTCAGCGTAAATTACTGGCCAGATAAAAGCGACCCGGAGAGTCTCATGACACTCTCCATGACTGTT AATGATTAGGAAGGGCAAGG
Downstream 100 bases:
>100_bases AGATTGTCTGCATAGAAAAGTAATCATGATTAGGAAGGGCAAGGATGAACGAAAAACATCAACAGCGGCATGTCGAACAA GAGATGGTTCAGGCCGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MNEKHQQRHVEQEMVQAAINEHFSRQSRLTPRLKNWEEDLPENNEEQTVPGQLVQVTEINDIWMELPRYENIMWGGAWLG IISSIVPMVVMIYIGIDILSSEFDITLFLIMLLGLFFMLSMFLLNLRMALFVPRDQPIRFNRKRQKVYVFDYHRKQWNPW VKWPTTIKVFDWADIHGEISHESDRYDQGFRLYCAVCKPGTWDVAERFILSRALRHIVTQRKLWSHCCQYMQHKPVVMDP LEPGRPDNWKPRKNMCWSEDIDRESTTAPAPD
Sequences:
>Translated_272_residues MNEKHQQRHVEQEMVQAAINEHFSRQSRLTPRLKNWEEDLPENNEEQTVPGQLVQVTEINDIWMELPRYENIMWGGAWLG IISSIVPMVVMIYIGIDILSSEFDITLFLIMLLGLFFMLSMFLLNLRMALFVPRDQPIRFNRKRQKVYVFDYHRKQWNPW VKWPTTIKVFDWADIHGEISHESDRYDQGFRLYCAVCKPGTWDVAERFILSRALRHIVTQRKLWSHCCQYMQHKPVVMDP LEPGRPDNWKPRKNMCWSEDIDRESTTAPAPD >Mature_272_residues MNEKHQQRHVEQEMVQAAINEHFSRQSRLTPRLKNWEEDLPENNEEQTVPGQLVQVTEINDIWMELPRYENIMWGGAWLG IISSIVPMVVMIYIGIDILSSEFDITLFLIMLLGLFFMLSMFLLNLRMALFVPRDQPIRFNRKRQKVYVFDYHRKQWNPW VKWPTTIKVFDWADIHGEISHESDRYDQGFRLYCAVCKPGTWDVAERFILSRALRHIVTQRKLWSHCCQYMQHKPVVMDP LEPGRPDNWKPRKNMCWSEDIDRESTTAPAPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32477; Mature: 32477
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEKHQQRHVEQEMVQAAINEHFSRQSRLTPRLKNWEEDLPENNEEQTVPGQLVQVTEIN CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHCCCCCCCCCCCCCEEEEEEHH DIWMELPRYENIMWGGAWLGIISSIVPMVVMIYIGIDILSSEFDITLFLIMLLGLFFMLS HHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH MFLLNLRMALFVPRDQPIRFNRKRQKVYVFDYHRKQWNPWVKWPTTIKVFDWADIHGEIS HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCC HESDRYDQGFRLYCAVCKPGTWDVAERFILSRALRHIVTQRKLWSHCCQYMQHKPVVMDP CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC LEPGRPDNWKPRKNMCWSEDIDRESTTAPAPD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNEKHQQRHVEQEMVQAAINEHFSRQSRLTPRLKNWEEDLPENNEEQTVPGQLVQVTEIN CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHCCCCCCCCCCCCCEEEEEEHH DIWMELPRYENIMWGGAWLGIISSIVPMVVMIYIGIDILSSEFDITLFLIMLLGLFFMLS HHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH MFLLNLRMALFVPRDQPIRFNRKRQKVYVFDYHRKQWNPWVKWPTTIKVFDWADIHGEIS HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCC HESDRYDQGFRLYCAVCKPGTWDVAERFILSRALRHIVTQRKLWSHCCQYMQHKPVVMDP CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC LEPGRPDNWKPRKNMCWSEDIDRESTTAPAPD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA