| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024818
Identifier: 170024818
GI number: 170024818
Start: 2851981
End: 2852763
Strand: Reverse
Name: 170024818
Synonym: YPK_2593
Alternate gene names: NA
Gene position: 2852763-2851981 (Counterclockwise)
Preceding gene: 170024819
Following gene: 170024817
Centisome position: 60.83
GC content: 47.38
Gene sequence:
>783_bases ATGCAGGAAATGCGCGCAGGGTATTTAAAAGAAAGGGATCCCAGTATTTCCAGGTTAATTCCTCAAGTAAAGTATTGGGA GGAAGATTTACCTGAACAGGATGAAGAACAACCGACAGCCCCGCGACTAATCCGCGTCAATAAAATCAATGACACGTGGA TGGAAATTCCTCGCTATGAAAATATTATGTGGTCTGGAATGTGGATTATTGGATTTGGTTGCTTTATTCCTATTACAATT GCCATATTCTTCCTCCAGCTTCCAGGACTTATTTTTGAAGTATCAATGAAATTACTTTATAGTTTTTTTATTTTTTTAGC TTTTTCCATGCTTACTTTTTTTTTCAGAATGGCTTTATTTGTCCCCCGAGGCACCCCGGTTCGCTTTAACCGCAAGCGCC AGAAAGTGTATGTCTACGAACATCAGCGCAGTAACTGGAACCCATGGTCACGCTGGCCGACAGTGATTAAGGTCTTCGAC TGGGCGGATATTCACGGTGAAATGGTGCGTCAGGTTGGGCGTTACGATTCAGGGCACCGCCTGTCCTGCGCAGTCTGCAA GCCGGGCACCTATGAGGTGGTGGACCGCTTTATCCTCAGTTGGACGGAAGGTGATAGCCGGGTGATCCGCGGATTATGGA GCCACTGCTGCCAGTATATGCAGGGCAAAACGGTACCCGAAACACCGCTGTTGACCCGAAAACCCTGGAGCTGGTGCCCG ATCAATACTATTCACTGGCCTGAAGATATTGAGCGGGGATCCACTACGGCACCGGATGCGTAA
Upstream 100 bases:
>100_bases TAAAACCGACCCGCAGTATCAACTGGCTCTGGTTGTGAATACTGAGAAATAAGGGAATATCATTGTGAATAAGAAAAACA GTCAACCGCCAAGGGAAAGT
Downstream 100 bases:
>100_bases TCTGGTGTAACTCGCGTCTTCCACACTGTATGCGCAGAGGCTTCAGGCTAAATACGTCATGACAGAATGCTCCCCCTCTT CGTTATTTTATATTTGAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MQEMRAGYLKERDPSISRLIPQVKYWEEDLPEQDEEQPTAPRLIRVNKINDTWMEIPRYENIMWSGMWIIGFGCFIPITI AIFFLQLPGLIFEVSMKLLYSFFIFLAFSMLTFFFRMALFVPRGTPVRFNRKRQKVYVYEHQRSNWNPWSRWPTVIKVFD WADIHGEMVRQVGRYDSGHRLSCAVCKPGTYEVVDRFILSWTEGDSRVIRGLWSHCCQYMQGKTVPETPLLTRKPWSWCP INTIHWPEDIERGSTTAPDA
Sequences:
>Translated_260_residues MQEMRAGYLKERDPSISRLIPQVKYWEEDLPEQDEEQPTAPRLIRVNKINDTWMEIPRYENIMWSGMWIIGFGCFIPITI AIFFLQLPGLIFEVSMKLLYSFFIFLAFSMLTFFFRMALFVPRGTPVRFNRKRQKVYVYEHQRSNWNPWSRWPTVIKVFD WADIHGEMVRQVGRYDSGHRLSCAVCKPGTYEVVDRFILSWTEGDSRVIRGLWSHCCQYMQGKTVPETPLLTRKPWSWCP INTIHWPEDIERGSTTAPDA >Mature_260_residues MQEMRAGYLKERDPSISRLIPQVKYWEEDLPEQDEEQPTAPRLIRVNKINDTWMEIPRYENIMWSGMWIIGFGCFIPITI AIFFLQLPGLIFEVSMKLLYSFFIFLAFSMLTFFFRMALFVPRGTPVRFNRKRQKVYVYEHQRSNWNPWSRWPTVIKVFD WADIHGEMVRQVGRYDSGHRLSCAVCKPGTYEVVDRFILSWTEGDSRVIRGLWSHCCQYMQGKTVPETPLLTRKPWSWCP INTIHWPEDIERGSTTAPDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30873; Mature: 30873
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEMRAGYLKERDPSISRLIPQVKYWEEDLPEQDEEQPTAPRLIRVNKINDTWMEIPRYE CCCHHHCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHCCCCC NIMWSGMWIIGFGCFIPITIAIFFLQLPGLIFEVSMKLLYSFFIFLAFSMLTFFFRMALF CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPRGTPVRFNRKRQKVYVYEHQRSNWNPWSRWPTVIKVFDWADIHGEMVRQVGRYDSGHR CCCCCCEEECCCCCEEEEEECCCCCCCCHHHCCHHEEEECCHHHHHHHHHHHHCCCCCCE LSCAVCKPGTYEVVDRFILSWTEGDSRVIRGLWSHCCQYMQGKTVPETPLLTRKPWSWCP EEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC INTIHWPEDIERGSTTAPDA CCCCCCHHHHHCCCCCCCCC >Mature Secondary Structure MQEMRAGYLKERDPSISRLIPQVKYWEEDLPEQDEEQPTAPRLIRVNKINDTWMEIPRYE CCCHHHCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHCCCCC NIMWSGMWIIGFGCFIPITIAIFFLQLPGLIFEVSMKLLYSFFIFLAFSMLTFFFRMALF CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPRGTPVRFNRKRQKVYVYEHQRSNWNPWSRWPTVIKVFDWADIHGEMVRQVGRYDSGHR CCCCCCEEECCCCCEEEEEECCCCCCCCHHHCCHHEEEECCHHHHHHHHHHHHCCCCCCE LSCAVCKPGTYEVVDRFILSWTEGDSRVIRGLWSHCCQYMQGKTVPETPLLTRKPWSWCP EEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC INTIHWPEDIERGSTTAPDA CCCCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA