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The map label for this gene is 170024815

Identifier: 170024815

GI number: 170024815

Start: 2845578

End: 2847179

Strand: Reverse

Name: 170024815

Synonym: YPK_2590

Alternate gene names: NA

Gene position: 2847179-2845578 (Counterclockwise)

Preceding gene: 170024816

Following gene: 170024814

Centisome position: 60.71

GC content: 60.24

Gene sequence:

>1602_bases
ATGGCGACGTTAACTACCTTGCTCACCGCTTGTGCCGCAGAGCCTGAGCCACTTTTACAGCAGGCCAGACAACAGGTTGC
GCTCTGGGAACGTTGGTTGCAACCGGTGACACCCGATAAGCATACCGGTGAAGACCCCGGTTACGATGACCACTTCCAAC
AGATGCGTGAAGAGGTCAATAAGCTCTCGGGTGCCGATACCACGCTGACCTGCGAGCTGGCTGAAAAGCTGTTCACCACA
CACGGCAAGGATGTGCGGGTGGCAACCTATTACGTCTGGGCGCGGTTGCACCGTGACGGCGAGGCCGGGCTGGCGGATGG
CCTTTCCCTGCTGGCCGGGCTGATCACGCGCTTTGGTGAGGGCCTGCATCCGCTGCGTGCAACCAGCCGGAAAACCGCGT
TGGAGTGGCTGGCCGGCTCCCGGATGCGCGACAGCTTGTCACTTTACCCGGAAGTGGATAAAGCCGATTTTGAGCGTATC
GTGGGCGCACTGGCCCTTATCGAACAGGGGCTCAGTCTCTGGGACGAAGGCGTCCGGCCGCAACTGGGCGGGTTGTATAC
CGCCCTGGAAAACCGCCTCGTGCAATCTGGCGGGCTAAATGCCGTGGTGCCGCAAAACAGCAGCGGGTCATCATCGGCAG
GCAGCTTGAACCCGGCCAACATGGCGTCACCGGCGTTGCGCCCAGTGCAATCGGGGCGTGACCTGCTCGATCAGACCAAA
ACGCTGGCAAAATACCTGCGCAACCAGCCGCAGGGCTGGCTCTCCGGGCATCATCTTATCAAAAGCGTGCGCTGGGATAC
GGTACATCAGTCACCGCCATTAGATGTGAACGGACGGACCCGGCTGGTACCGCCGCGCCCGGAATATCGCGTACAGCTCA
AGCGGCTTTATCTGCAACAAAACTGGCTGGCGTTGCTGGAACAGGCCGAATCGATATTTGCCGAAGGGGTTAACCATTTC
TGGCTCGATGTGCAGTGGTACCTGCATCAGGCCCTCAGCAAAGCGGGGGCCCCATTCGATGGCTGGGCGAGCTGTATCAC
GCAGGATTTACGGTTATTACTGACCCGGCTGCCGGGGCTGGAAGGGCTATGCTGGAGTGACGGCACGCCATTTGCCGATG
AGGTGACGCTGGGGTGGATAAACCAGCAGGTACTGGAGTCGGTCTCGGGCTGGGGCAGCGAGCCGGCCGCCGTTTCATCC
GGTGAGGATGGCATTCTGTTGCTGGAGCCAGAAGCTTTGGCTCAGGCGGACAGCGAAGGAATTGAAGCGGCGCTTAACTG
GTTGCAGTCACGACCGGGGATCACCACGGCGCGCCATCAGTGGCTGCTGCGTCTGGTGATGGCCCGGGTGGCGGAGCAGT
ACGGTAAGAACGATATGGCACTGCATCTGCTGAGTGGCCTTGATAGCAGCGGCGCGTTGTTGACCTTGCCACAGTGGGAG
CCGGGGTTGGTGTTTGAAGTTAAAGCCCGCCGTTTGAAGCTGTTGCGTATGAAGGCACAACGGGGTGACAGTGATAAAAC
CCGCCTGCATGCTGAAATGGAAAGCCTGCTCGGTGGGCTTATCGCCCTCGACCCGGCCCGTGCGGCCGTATTATGCGGAT
AA

Upstream 100 bases:

>100_bases
CACGCGCCGCTTGCGATTGCTGACATGTCAGACGATGAAGACATGGCAGAAGACTGATGTCTTCTATCATCCCCCCCAAT
AAACACCCACAGGAGCCGTT

Downstream 100 bases:

>100_bases
CAGAGAAGGAACAGACAATGGCAAAAGGCTATTACCTTGGGGTTGGGGATGAAACAACCTGCGGCGGCGTGATCATCGAA
GGTGACGCCACACATGTCTT

Product: type VI secretion-associated protein

Products: NA

Alternate protein names: ImpA Domain-Containing Protein; Type VI Secretion System Protein VasJ; ImpA N-Terminal; Conserved Protein; ImpA-Like Protein

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MATLTTLLTACAAEPEPLLQQARQQVALWERWLQPVTPDKHTGEDPGYDDHFQQMREEVNKLSGADTTLTCELAEKLFTT
HGKDVRVATYYVWARLHRDGEAGLADGLSLLAGLITRFGEGLHPLRATSRKTALEWLAGSRMRDSLSLYPEVDKADFERI
VGALALIEQGLSLWDEGVRPQLGGLYTALENRLVQSGGLNAVVPQNSSGSSSAGSLNPANMASPALRPVQSGRDLLDQTK
TLAKYLRNQPQGWLSGHHLIKSVRWDTVHQSPPLDVNGRTRLVPPRPEYRVQLKRLYLQQNWLALLEQAESIFAEGVNHF
WLDVQWYLHQALSKAGAPFDGWASCITQDLRLLLTRLPGLEGLCWSDGTPFADEVTLGWINQQVLESVSGWGSEPAAVSS
GEDGILLLEPEALAQADSEGIEAALNWLQSRPGITTARHQWLLRLVMARVAEQYGKNDMALHLLSGLDSSGALLTLPQWE
PGLVFEVKARRLKLLRMKAQRGDSDKTRLHAEMESLLGGLIALDPARAAVLCG

Sequences:

>Translated_533_residues
MATLTTLLTACAAEPEPLLQQARQQVALWERWLQPVTPDKHTGEDPGYDDHFQQMREEVNKLSGADTTLTCELAEKLFTT
HGKDVRVATYYVWARLHRDGEAGLADGLSLLAGLITRFGEGLHPLRATSRKTALEWLAGSRMRDSLSLYPEVDKADFERI
VGALALIEQGLSLWDEGVRPQLGGLYTALENRLVQSGGLNAVVPQNSSGSSSAGSLNPANMASPALRPVQSGRDLLDQTK
TLAKYLRNQPQGWLSGHHLIKSVRWDTVHQSPPLDVNGRTRLVPPRPEYRVQLKRLYLQQNWLALLEQAESIFAEGVNHF
WLDVQWYLHQALSKAGAPFDGWASCITQDLRLLLTRLPGLEGLCWSDGTPFADEVTLGWINQQVLESVSGWGSEPAAVSS
GEDGILLLEPEALAQADSEGIEAALNWLQSRPGITTARHQWLLRLVMARVAEQYGKNDMALHLLSGLDSSGALLTLPQWE
PGLVFEVKARRLKLLRMKAQRGDSDKTRLHAEMESLLGGLIALDPARAAVLCG
>Mature_532_residues
ATLTTLLTACAAEPEPLLQQARQQVALWERWLQPVTPDKHTGEDPGYDDHFQQMREEVNKLSGADTTLTCELAEKLFTTH
GKDVRVATYYVWARLHRDGEAGLADGLSLLAGLITRFGEGLHPLRATSRKTALEWLAGSRMRDSLSLYPEVDKADFERIV
GALALIEQGLSLWDEGVRPQLGGLYTALENRLVQSGGLNAVVPQNSSGSSSAGSLNPANMASPALRPVQSGRDLLDQTKT
LAKYLRNQPQGWLSGHHLIKSVRWDTVHQSPPLDVNGRTRLVPPRPEYRVQLKRLYLQQNWLALLEQAESIFAEGVNHFW
LDVQWYLHQALSKAGAPFDGWASCITQDLRLLLTRLPGLEGLCWSDGTPFADEVTLGWINQQVLESVSGWGSEPAAVSSG
EDGILLLEPEALAQADSEGIEAALNWLQSRPGITTARHQWLLRLVMARVAEQYGKNDMALHLLSGLDSSGALLTLPQWEP
GLVFEVKARRLKLLRMKAQRGDSDKTRLHAEMESLLGGLIALDPARAAVLCG

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58761; Mature: 58629

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLTTLLTACAAEPEPLLQQARQQVALWERWLQPVTPDKHTGEDPGYDDHFQQMREEVN
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
KLSGADTTLTCELAEKLFTTHGKDVRVATYYVWARLHRDGEAGLADGLSLLAGLITRFGE
HHCCCCCEEEHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
GLHPLRATSRKTALEWLAGSRMRDSLSLYPEVDKADFERIVGALALIEQGLSLWDEGVRP
CCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
QLGGLYTALENRLVQSGGLNAVVPQNSSGSSSAGSLNPANMASPALRPVQSGRDLLDQTK
HHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHH
TLAKYLRNQPQGWLSGHHLIKSVRWDTVHQSPPLDVNGRTRLVPPRPEYRVQLKRLYLQQ
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHH
NWLALLEQAESIFAEGVNHFWLDVQWYLHQALSKAGAPFDGWASCITQDLRLLLTRLPGL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
EGLCWSDGTPFADEVTLGWINQQVLESVSGWGSEPAAVSSGEDGILLLEPEALAQADSEG
CCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHCCHHH
IEAALNWLQSRPGITTARHQWLLRLVMARVAEQYGKNDMALHLLSGLDSSGALLTLPQWE
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCCCC
PGLVFEVKARRLKLLRMKAQRGDSDKTRLHAEMESLLGGLIALDPARAAVLCG
CCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure 
ATLTTLLTACAAEPEPLLQQARQQVALWERWLQPVTPDKHTGEDPGYDDHFQQMREEVN
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
KLSGADTTLTCELAEKLFTTHGKDVRVATYYVWARLHRDGEAGLADGLSLLAGLITRFGE
HHCCCCCEEEHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
GLHPLRATSRKTALEWLAGSRMRDSLSLYPEVDKADFERIVGALALIEQGLSLWDEGVRP
CCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
QLGGLYTALENRLVQSGGLNAVVPQNSSGSSSAGSLNPANMASPALRPVQSGRDLLDQTK
HHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHH
TLAKYLRNQPQGWLSGHHLIKSVRWDTVHQSPPLDVNGRTRLVPPRPEYRVQLKRLYLQQ
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHH
NWLALLEQAESIFAEGVNHFWLDVQWYLHQALSKAGAPFDGWASCITQDLRLLLTRLPGL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
EGLCWSDGTPFADEVTLGWINQQVLESVSGWGSEPAAVSSGEDGILLLEPEALAQADSEG
CCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHCCHHH
IEAALNWLQSRPGITTARHQWLLRLVMARVAEQYGKNDMALHLLSGLDSSGALLTLPQWE
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCCCC
PGLVFEVKARRLKLLRMKAQRGDSDKTRLHAEMESLLGGLIALDPARAAVLCG
CCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA