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The map label for this gene is yohK [H]

Identifier: 170024785

GI number: 170024785

Start: 2809363

End: 2810058

Strand: Direct

Name: yohK [H]

Synonym: YPK_2560

Alternate gene names: 170024785

Gene position: 2809363-2810058 (Clockwise)

Preceding gene: 170024784

Following gene: 170024786

Centisome position: 59.91

GC content: 48.13

Gene sequence:

>696_bases
ATGATCAGCAATCTATGGTGGTCACTGCCGTTAACCTTAATAGTGTTCTTTGGTGCACGCCAGCTATCCCGTTGGGCGAA
AATCCCCCTACTAAATCCACTATTGATATCAATGGTCGTTATTATTCCATTGCTATTAGTCACGCATATGCCTTACGCCA
ACTATTTTGCTGGTAGTAAAATTCTGAATGACTTGCTACAACCCGCGGTCGTGGCGCTCGCTTTTCCACTGTATGAGCAG
CTACATCAGATCCGCGCCAGTTGGAAATCAATTATTGCCATTTGCTTTATTGGCAGTATCACTGCCATGGTCAGCGGTAC
AGCGATAGCCCTGTGGATGGGGGCAACGCCAGAAATTGCGGCGTCCATATTACCTAAATCCGTAACGACACCGATTGCGA
TGGCAGTGGCAGAGTCTCTTCATGGTTTACCCGCTATTAGCGCAGTTTGCGTTATTTTTGCCGGTATTTTAGGGGCGGTG
TTTGGCCACAGTTTGCTGAATTTATTAAAAATCACCACCAAAGCATCCCGTGGATTGGCGATGGGGACGGCGTCTCATGC
CTTAGGGTCCGCCCGTTGCGCCGAACTAGATTTTAAAGAGGGTGCGTTCAGCTCTTTAGCCCTAGTCATTTGCGGGATTA
TCACCTCACTACTGGCTCCGTTCCTGTTCCCGGTCCTATTACATTTGTTTGGTTGA

Upstream 100 bases:

>100_bases
TCAGTACCTTAATTGTTATGTTAGTGGTGGCCTATAGCTCACATTATGTCCACCGTGACCGCAAAGTCATTAGCCCTTCA
ACACCGACTGAGGGGGAAAA

Downstream 100 bases:

>100_bases
ACCCACTTTCCCCTGGCGTGATAGCGACGTCAGGGTCTGTAATCCTTATCAGACCTTATCAGAGCCGCCAATTATCGTTA
AGGTCTAAGCTGTAGTTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MISNLWWSLPLTLIVFFGARQLSRWAKIPLLNPLLISMVVIIPLLLVTHMPYANYFAGSKILNDLLQPAVVALAFPLYEQ
LHQIRASWKSIIAICFIGSITAMVSGTAIALWMGATPEIAASILPKSVTTPIAMAVAESLHGLPAISAVCVIFAGILGAV
FGHSLLNLLKITTKASRGLAMGTASHALGSARCAELDFKEGAFSSLALVICGIITSLLAPFLFPVLLHLFG

Sequences:

>Translated_231_residues
MISNLWWSLPLTLIVFFGARQLSRWAKIPLLNPLLISMVVIIPLLLVTHMPYANYFAGSKILNDLLQPAVVALAFPLYEQ
LHQIRASWKSIIAICFIGSITAMVSGTAIALWMGATPEIAASILPKSVTTPIAMAVAESLHGLPAISAVCVIFAGILGAV
FGHSLLNLLKITTKASRGLAMGTASHALGSARCAELDFKEGAFSSLALVICGIITSLLAPFLFPVLLHLFG
>Mature_231_residues
MISNLWWSLPLTLIVFFGARQLSRWAKIPLLNPLLISMVVIIPLLLVTHMPYANYFAGSKILNDLLQPAVVALAFPLYEQ
LHQIRASWKSIIAICFIGSITAMVSGTAIALWMGATPEIAASILPKSVTTPIAMAVAESLHGLPAISAVCVIFAGILGAV
FGHSLLNLLKITTKASRGLAMGTASHALGSARCAELDFKEGAFSSLALVICGIITSLLAPFLFPVLLHLFG

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=231, Percent_Identity=76.1904761904762, Blast_Score=365, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24575; Mature: 24575

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISNLWWSLPLTLIVFFGARQLSRWAKIPLLNPLLISMVVIIPLLLVTHMPYANYFAGSK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ILNDLLQPAVVALAFPLYEQLHQIRASWKSIIAICFIGSITAMVSGTAIALWMGATPEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCHHHH
ASILPKSVTTPIAMAVAESLHGLPAISAVCVIFAGILGAVFGHSLLNLLKITTKASRGLA
HHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
MGTASHALGSARCAELDFKEGAFSSLALVICGIITSLLAPFLFPVLLHLFG
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MISNLWWSLPLTLIVFFGARQLSRWAKIPLLNPLLISMVVIIPLLLVTHMPYANYFAGSK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ILNDLLQPAVVALAFPLYEQLHQIRASWKSIIAICFIGSITAMVSGTAIALWMGATPEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCHHHH
ASILPKSVTTPIAMAVAESLHGLPAISAVCVIFAGILGAVFGHSLLNLLKITTKASRGLA
HHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
MGTASHALGSARCAELDFKEGAFSSLALVICGIITSLLAPFLFPVLLHLFG
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]