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The map label for this gene is asmA [H]

Identifier: 170024775

GI number: 170024775

Start: 2796341

End: 2798197

Strand: Reverse

Name: asmA [H]

Synonym: YPK_2550

Alternate gene names: 170024775

Gene position: 2798197-2796341 (Counterclockwise)

Preceding gene: 170024776

Following gene: 170024773

Centisome position: 59.67

GC content: 48.03

Gene sequence:

>1857_bases
ATGAGACGATTACTGACAATGTTAGTTATCCTGCTAATTGTGTTAGTTGCAGGTATGAGCGCATTAGTGCTGTTGGTGAA
TCCTAATGATTTTCGCGCCTATATGGTCAAACAGGTAGAGAAAAAGAGTGGTTACCACTTGCAGTTGGAGGGTGATTTGC
GTTGGCACGTCTGGCCGCAACTCAGCATTATCGCTGGGCGCATGGCGCTAACCGCACCTGGCGCACTAGAACCGGTGGTC
AGTGCTGAAAATATGCGGTTGGATGTTAAACTTTGGCCGTTACTGTCACATCAACTGGATGTTAAACAAGTGATGTTGAA
AGGGGCGGTGATCCGTTTGACCCCTGACAGCGAGGCCCAGCAACAGATAGATGCGCCGGTCGCCCCAATTGCACCTGCGG
GCAGTACGCCAGTGAGCGATAACCGTGGCTGGACGCTAGACATCAATAGACTTCAAATCGCGGACAGTTTGCTTATTTGG
CAACGTTCTGACAACGACCAAATTAATGTCCGGGATATCAATCTCGAACTCAAGCAAGGCGGGCAGCGTCAGGTGCAGGT
CACTCTTGCCAGCCGTGTTAATCGCAATCAGCGGGACTTAACTTTCTCAATGGTCATTGATGCCGATATGCATCAATATC
CCCGACAGTTCAGTGCCAATATCAGCCAGTTCACTTATAAACTGGAAGGGGCTGATATTCCTGCAGGGGGGATCAGTGGT
GGAGGGGCGTTGGAAGCCAGTTATCAGAGTGATATTCAGCAATTACTACTTAATCAGTTAAATTTTACTGCCAATAATAA
CCAATTGGCAGGCAGTGTTAAGGCGACCTTTGGTGATGTGCCTGACTACGTGGTTAATTTGACCTCTGATAATCTCAATC
TTGATGCGATCTTTGGTTGGCAGCCGAAGAGTTCAACAGCCAGTACCGACGAAGCCAAACAGCCTGTCACGACAGCACCG
GTTATTGCTATTCAGATAGATGATGATGTAGGGCAAAATTTACAAGCATTACGTGATTTTACGGCGCAAACGACGGTTGT
CGCCAATAATGTGGTTTATCGCAACATTAACATCAACCAGTTGAATTTACAGGCAACTAACCAGCAGGGTGACTTACAGG
TAACTCGCCTAACCGGTAATGCGTTGGAGGGGGACTTCTCACTCGCGGGGGCATTGGATGTTACGGGCAAAAAAGTGTTG
GCTACGGTGAATCCGCTGATAAACCATATGGAATTGGGGCCAGTATTGCAGGCTGCAGGTTTACCGCAGGTAATGACGGG
TAAGTTTTCCATGCAAGCGCAGTTGTCTGGAGATGGTGTGAATCTCGCAGCATTTAAACATCGCTGGCGGGGGGAAGCGC
AAGTCAGTATGAATAATGCCCGGTTACAGGGCCTAAATATTCAGCAATTGATTCAACAGGCTGTCACACGTAGTACCAAT
GATGTCAAAGGTCAGGAACGCTATGAGCGATACACTGAGGTTAAACAACTGCAAGCCTCTCTGGCGCTGAACCGAGGTGC
AGTGAAAGTCAGCGGCCTCAATGCCAGTTCGTCGTTAATTTCCGTTAAAGGCAGCGGGGGGCTTAATCTCCCAACTCAGC
AATGTGACATGAATCTAGCTGTACGCGTTATGCAAGGTTGGAACGGGCAGAGTAGCCTTGTCAAAACATTACAAAATACA
GATATTCCGTTGCGTATTTATGGCCCATGGACCCAGCTCAATTATCAATTGAATGTTGATCAATTGCTGCGTAGTGAGTT
ACAGCAGCGGGCCAAGAAAGCGTTGGGGGAGTGGGCTGAACGTAACCAACAAAATCGCCGTGTGGACGATCTGAAAAAGT
CACTTGATAAGTTGTAA

Upstream 100 bases:

>100_bases
AATCCCAACGGTTCGCTTTCCCTTCATTTGACTTGGTCAGCAGTCTGGACTAGTCATTCTTTTTATTGAGAATTTTAGCC
TGTTTGGACAAGAGGACGTC

Downstream 100 bases:

>100_bases
GCCATCCATCGGAAACAGAGGGTGGAAACAGGTAGTGGAAATAGGTAGTGGAAAGAGATAGGCCCGATGGTTTCTCCACC
GGGCCTAATCATTTATTTTT

Product: putative assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 618; Mature: 618

Protein sequence:

>618_residues
MRRLLTMLVILLIVLVAGMSALVLLVNPNDFRAYMVKQVEKKSGYHLQLEGDLRWHVWPQLSIIAGRMALTAPGALEPVV
SAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLTPDSEAQQQIDAPVAPIAPAGSTPVSDNRGWTLDINRLQIADSLLIW
QRSDNDQINVRDINLELKQGGQRQVQVTLASRVNRNQRDLTFSMVIDADMHQYPRQFSANISQFTYKLEGADIPAGGISG
GGALEASYQSDIQQLLLNQLNFTANNNQLAGSVKATFGDVPDYVVNLTSDNLNLDAIFGWQPKSSTASTDEAKQPVTTAP
VIAIQIDDDVGQNLQALRDFTAQTTVVANNVVYRNININQLNLQATNQQGDLQVTRLTGNALEGDFSLAGALDVTGKKVL
ATVNPLINHMELGPVLQAAGLPQVMTGKFSMQAQLSGDGVNLAAFKHRWRGEAQVSMNNARLQGLNIQQLIQQAVTRSTN
DVKGQERYERYTEVKQLQASLALNRGAVKVSGLNASSSLISVKGSGGLNLPTQQCDMNLAVRVMQGWNGQSSLVKTLQNT
DIPLRIYGPWTQLNYQLNVDQLLRSELQQRAKKALGEWAERNQQNRRVDDLKKSLDKL

Sequences:

>Translated_618_residues
MRRLLTMLVILLIVLVAGMSALVLLVNPNDFRAYMVKQVEKKSGYHLQLEGDLRWHVWPQLSIIAGRMALTAPGALEPVV
SAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLTPDSEAQQQIDAPVAPIAPAGSTPVSDNRGWTLDINRLQIADSLLIW
QRSDNDQINVRDINLELKQGGQRQVQVTLASRVNRNQRDLTFSMVIDADMHQYPRQFSANISQFTYKLEGADIPAGGISG
GGALEASYQSDIQQLLLNQLNFTANNNQLAGSVKATFGDVPDYVVNLTSDNLNLDAIFGWQPKSSTASTDEAKQPVTTAP
VIAIQIDDDVGQNLQALRDFTAQTTVVANNVVYRNININQLNLQATNQQGDLQVTRLTGNALEGDFSLAGALDVTGKKVL
ATVNPLINHMELGPVLQAAGLPQVMTGKFSMQAQLSGDGVNLAAFKHRWRGEAQVSMNNARLQGLNIQQLIQQAVTRSTN
DVKGQERYERYTEVKQLQASLALNRGAVKVSGLNASSSLISVKGSGGLNLPTQQCDMNLAVRVMQGWNGQSSLVKTLQNT
DIPLRIYGPWTQLNYQLNVDQLLRSELQQRAKKALGEWAERNQQNRRVDDLKKSLDKL
>Mature_618_residues
MRRLLTMLVILLIVLVAGMSALVLLVNPNDFRAYMVKQVEKKSGYHLQLEGDLRWHVWPQLSIIAGRMALTAPGALEPVV
SAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLTPDSEAQQQIDAPVAPIAPAGSTPVSDNRGWTLDINRLQIADSLLIW
QRSDNDQINVRDINLELKQGGQRQVQVTLASRVNRNQRDLTFSMVIDADMHQYPRQFSANISQFTYKLEGADIPAGGISG
GGALEASYQSDIQQLLLNQLNFTANNNQLAGSVKATFGDVPDYVVNLTSDNLNLDAIFGWQPKSSTASTDEAKQPVTTAP
VIAIQIDDDVGQNLQALRDFTAQTTVVANNVVYRNININQLNLQATNQQGDLQVTRLTGNALEGDFSLAGALDVTGKKVL
ATVNPLINHMELGPVLQAAGLPQVMTGKFSMQAQLSGDGVNLAAFKHRWRGEAQVSMNNARLQGLNIQQLIQQAVTRSTN
DVKGQERYERYTEVKQLQASLALNRGAVKVSGLNASSSLISVKGSGGLNLPTQQCDMNLAVRVMQGWNGQSSLVKTLQNT
DIPLRIYGPWTQLNYQLNVDQLLRSELQQRAKKALGEWAERNQQNRRVDDLKKSLDKL

Specific function: Involved in the inhibition of assembly of mutant ompF proteins. In general, could be involved in the assembly of outer membrane proteins [H]

COG id: COG2982

COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788378, Length=625, Percent_Identity=46.08, Blast_Score=555, Evalue=1e-159,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007844 [H]

Pfam domain/function: PF05170 AsmA [H]

EC number: NA

Molecular weight: Translated: 68044; Mature: 68044

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLLTMLVILLIVLVAGMSALVLLVNPNDFRAYMVKQVEKKSGYHLQLEGDLRWHVWPQ
CHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCEEEEECCC
LSIIAGRMALTAPGALEPVVSAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLTPDSEAQ
EEEEECCEEECCCCCCCCCCCCCCCEEEEEEEEHHCCCCCHHHHHHCCEEEEECCCCHHH
QQIDAPVAPIAPAGSTPVSDNRGWTLDINRLQIADSLLIWQRSDNDQINVRDINLELKQG
HHHCCCCCCCCCCCCCCCCCCCCEEEEEHHEEEECEEEEEEECCCCEEEEEEEEEEECCC
GQRQVQVTLASRVNRNQRDLTFSMVIDADMHQYPRQFSANISQFTYKLEGADIPAGGISG
CCEEEEEEEHHHCCCCCCCEEEEEEEECHHHHCCHHHCCCHHHEEEEECCCCCCCCCCCC
GGALEASYQSDIQQLLLNQLNFTANNNQLAGSVKATFGDVPDYVVNLTSDNLNLDAIFGW
CCCEECHHHHHHHHHHHHHHCCCCCCCEEECEEEECCCCCCCEEEEEECCCCEEEEEECC
QPKSSTASTDEAKQPVTTAPVIAIQIDDDVGQNLQALRDFTAQTTVVANNVVYRNININQ
CCCCCCCCCCHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCEEEEECCEEEEECCCEE
LNLQATNQQGDLQVTRLTGNALEGDFSLAGALDVTGKKVLATVNPLINHMELGPVLQAAG
EEEEECCCCCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHCC
LPQVMTGKFSMQAQLSGDGVNLAAFKHRWRGEAQVSMNNARLQGLNIQQLIQQAVTRSTN
CCCEEECCEEEEEEECCCCEEEHHHHHCCCCCEEEEECCCEEECCCHHHHHHHHHHCCCC
DVKGQERYERYTEVKQLQASLALNRGAVKVSGLNASSSLISVKGSGGLNLPTQQCDMNLA
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCCCCHHHCCCCEE
VRVMQGWNGQSSLVKTLQNTDIPLRIYGPWTQLNYQLNVDQLLRSELQQRAKKALGEWAE
EEEECCCCCHHHHHHHHHCCCCCEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHH
RNQQNRRVDDLKKSLDKL
CCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MRRLLTMLVILLIVLVAGMSALVLLVNPNDFRAYMVKQVEKKSGYHLQLEGDLRWHVWPQ
CHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCEEEEECCC
LSIIAGRMALTAPGALEPVVSAENMRLDVKLWPLLSHQLDVKQVMLKGAVIRLTPDSEAQ
EEEEECCEEECCCCCCCCCCCCCCCEEEEEEEEHHCCCCCHHHHHHCCEEEEECCCCHHH
QQIDAPVAPIAPAGSTPVSDNRGWTLDINRLQIADSLLIWQRSDNDQINVRDINLELKQG
HHHCCCCCCCCCCCCCCCCCCCCEEEEEHHEEEECEEEEEEECCCCEEEEEEEEEEECCC
GQRQVQVTLASRVNRNQRDLTFSMVIDADMHQYPRQFSANISQFTYKLEGADIPAGGISG
CCEEEEEEEHHHCCCCCCCEEEEEEEECHHHHCCHHHCCCHHHEEEEECCCCCCCCCCCC
GGALEASYQSDIQQLLLNQLNFTANNNQLAGSVKATFGDVPDYVVNLTSDNLNLDAIFGW
CCCEECHHHHHHHHHHHHHHCCCCCCCEEECEEEECCCCCCCEEEEEECCCCEEEEEECC
QPKSSTASTDEAKQPVTTAPVIAIQIDDDVGQNLQALRDFTAQTTVVANNVVYRNININQ
CCCCCCCCCCHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCEEEEECCEEEEECCCEE
LNLQATNQQGDLQVTRLTGNALEGDFSLAGALDVTGKKVLATVNPLINHMELGPVLQAAG
EEEEECCCCCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHCC
LPQVMTGKFSMQAQLSGDGVNLAAFKHRWRGEAQVSMNNARLQGLNIQQLIQQAVTRSTN
CCCEEECCEEEEEEECCCCEEEHHHHHCCCCCEEEEECCCEEECCCHHHHHHHHHHCCCC
DVKGQERYERYTEVKQLQASLALNRGAVKVSGLNASSSLISVKGSGGLNLPTQQCDMNLA
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCCCCHHHCCCCEE
VRVMQGWNGQSSLVKTLQNTDIPLRIYGPWTQLNYQLNVDQLLRSELQQRAKKALGEWAE
EEEECCCCCHHHHHHHHHCCCCCEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHH
RNQQNRRVDDLKKSLDKL
CCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7476172; 9097040; 9278503; 1324907 [H]