| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024748
Identifier: 170024748
GI number: 170024748
Start: 2764530
End: 2765066
Strand: Direct
Name: 170024748
Synonym: YPK_2523
Alternate gene names: NA
Gene position: 2764530-2765066 (Clockwise)
Preceding gene: 170024747
Following gene: 170024750
Centisome position: 58.95
GC content: 40.78
Gene sequence:
>537_bases ATGGCTGCTAAAATAATATCACTTATCAGACTGCTGACAAACCCCGATGACGCGATCTTGAACGGTGAGGATAGGCAGAG GAGTAAAGCGTCCGCGCCAAGGATGGCGCGGCTCGAGCCTACATGGATGTATTTACGGCGTCTTTACGATCTGCCTGTTC TCTCCGTCGCGGGCACTTTGTCAATAACCTCACTTATCTTTTTAATTTCTTTCTCTACTCTTGCAGCAGAAGTTAATCAG AATAAAGTGCAACAAAAAAACAATTTAGAAAATTTTGCATTAAGCATTTGTTTAGAAGAGGGTTTTCCTGATGGAGAAAT AAATAGCGAGGCCTTTTCTGCGGTCGGTGCTTATGTGGAGTTAGGCGCTTATCCTGTAGAAGCGTATGAAGAAGTTAGCG AACTTGCCAAAAAATTCCTAGAAAAGAAATATATCAGCAAAAATGGCGAATCAAAACTCACCGTTATGAAGTGTATCGAT TTATCTCAAAGTAGTGAGCTCAGTGCTATTAAAGATAAGTATACCCGTCATATTTAA
Upstream 100 bases:
>100_bases TGATGCGGAAGTTGTATGCTGCAACAGGCCATGCAACGCTATGGAACGGAATTTCATGTTCCGATTCCTGTTATTTTCAA CAGGCAGGTGGTGCCCAATT
Downstream 100 bases:
>100_bases CGTGCATATGCGTTGGCTGTCCTCGTTCACCCCAGTCACTTACCTGTGTAAGCTCCTGGGGATTCTCTCAGTTGCCGCCT TCCTGAAGCTCGAATTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MAAKIISLIRLLTNPDDAILNGEDRQRSKASAPRMARLEPTWMYLRRLYDLPVLSVAGTLSITSLIFLISFSTLAAEVNQ NKVQQKNNLENFALSICLEEGFPDGEINSEAFSAVGAYVELGAYPVEAYEEVSELAKKFLEKKYISKNGESKLTVMKCID LSQSSELSAIKDKYTRHI
Sequences:
>Translated_178_residues MAAKIISLIRLLTNPDDAILNGEDRQRSKASAPRMARLEPTWMYLRRLYDLPVLSVAGTLSITSLIFLISFSTLAAEVNQ NKVQQKNNLENFALSICLEEGFPDGEINSEAFSAVGAYVELGAYPVEAYEEVSELAKKFLEKKYISKNGESKLTVMKCID LSQSSELSAIKDKYTRHI >Mature_177_residues AAKIISLIRLLTNPDDAILNGEDRQRSKASAPRMARLEPTWMYLRRLYDLPVLSVAGTLSITSLIFLISFSTLAAEVNQN KVQQKNNLENFALSICLEEGFPDGEINSEAFSAVGAYVELGAYPVEAYEEVSELAKKFLEKKYISKNGESKLTVMKCIDL SQSSELSAIKDKYTRHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19871; Mature: 19740
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKIISLIRLLTNPDDAILNGEDRQRSKASAPRMARLEPTWMYLRRLYDLPVLSVAGTL CHHHHHHHHHHHCCCCCCEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH SITSLIFLISFSTLAAEVNQNKVQQKNNLENFALSICLEEGFPDGEINSEAFSAVGAYVE HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LGAYPVEAYEEVSELAKKFLEKKYISKNGESKLTVMKCIDLSQSSELSAIKDKYTRHI HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure AAKIISLIRLLTNPDDAILNGEDRQRSKASAPRMARLEPTWMYLRRLYDLPVLSVAGTL HHHHHHHHHHHCCCCCCEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH SITSLIFLISFSTLAAEVNQNKVQQKNNLENFALSICLEEGFPDGEINSEAFSAVGAYVE HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LGAYPVEAYEEVSELAKKFLEKKYISKNGESKLTVMKCIDLSQSSELSAIKDKYTRHI HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA