| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is yeeX [C]
Identifier: 170024739
GI number: 170024739
Start: 2752658
End: 2752975
Strand: Reverse
Name: yeeX [C]
Synonym: YPK_2514
Alternate gene names: 170024739
Gene position: 2752975-2752658 (Counterclockwise)
Preceding gene: 170024740
Following gene: 170024737
Centisome position: 58.71
GC content: 40.25
Gene sequence:
>318_bases ATGGATAATGCAAGTAAGCCAACTTTCCAGGACGTTTTGGAGTTTGTGCGTATGTTCCGTCGCAAAAACAAATTACAACG TGAAATCGTTGATAATGAAAAGAAAATCCGTGATAACCAAAAACGCGTTCTGTTGCTCGATAACCTGAGTGAATACATCA AACCAGGCATGAGCATTGAAGAGGTTCAGGCCATTATTGCTAACATGCGTGGTGACTACGAAGATCGTGTTGATGATTAC ATTATCAAAAATGCCGATCTGTCTAAAGAGCGTCGTGAGTTGTCGAAAAAACTGAAAGCGATGGGTGAAGTTAAGTAA
Upstream 100 bases:
>100_bases AAGCTAATGAATCTTGTCACCAGGCACGGCTAAGCGGTATGGTTTGGGTAGCGTGGTCGGCAGCCGTTGAATTTGTGTAA ACTTAAGTGAAGGTATGAAA
Downstream 100 bases:
>100_bases GGTTTATCCAACGTAGGATAACCCCCTTTTAGCGGTTTTGAAGGGGAAAGAGAGTGGGGCTGGCATCTATTGTCAGCCCT TTTTATTGGTGTGCCAGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MDNASKPTFQDVLEFVRMFRRKNKLQREIVDNEKKIRDNQKRVLLLDNLSEYIKPGMSIEEVQAIIANMRGDYEDRVDDY IIKNADLSKERRELSKKLKAMGEVK
Sequences:
>Translated_105_residues MDNASKPTFQDVLEFVRMFRRKNKLQREIVDNEKKIRDNQKRVLLLDNLSEYIKPGMSIEEVQAIIANMRGDYEDRVDDY IIKNADLSKERRELSKKLKAMGEVK >Mature_105_residues MDNASKPTFQDVLEFVRMFRRKNKLQREIVDNEKKIRDNQKRVLLLDNLSEYIKPGMSIEEVQAIIANMRGDYEDRVDDY IIKNADLSKERRELSKKLKAMGEVK
Specific function: Unknown
COG id: COG2926
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0265 family
Homologues:
Organism=Escherichia coli, GI145693155, Length=102, Percent_Identity=83.3333333333333, Blast_Score=176, Evalue=3e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1416_YERPP (A4TKJ3)
Other databases:
- EMBL: CP000668 - RefSeq: YP_001162778.1 - STRING: A4TKJ3 - GeneID: 5064074 - GenomeReviews: CP000668_GR - KEGG: ypp:YPDSF_1416 - eggNOG: COG2926 - HOGENOM: HBG296852 - OMA: YEDRVDE - ProtClustDB: PRK05423 - BioCyc: YPES386656:YPDSF_1416-MONOMER - HAMAP: MF_00683 - InterPro: IPR007458 - PIRSF: PIRSF028773 - ProDom: PD030876
Pfam domain/function: PF04363 DUF496
EC number: NA
Molecular weight: Translated: 12462; Mature: 12462
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNASKPTFQDVLEFVRMFRRKNKLQREIVDNEKKIRDNQKRVLLLDNLSEYIKPGMSIE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHH EVQAIIANMRGDYEDRVDDYIIKNADLSKERRELSKKLKAMGEVK HHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDNASKPTFQDVLEFVRMFRRKNKLQREIVDNEKKIRDNQKRVLLLDNLSEYIKPGMSIE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHH EVQAIIANMRGDYEDRVDDYIIKNADLSKERRELSKKLKAMGEVK HHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA